RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 PTCRAQ6ISU1 281 aaPredicted RBP16.88■□□□□ 0.29
PTPN21-208ENST00000556564 AKTIPQ9H8T0 292 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 DDX60LQ5H9U9 1706 aaKnown RBP16.87■□□□□ 0.29
PTPN21-208ENST00000556564 THSD7AQ9UPZ6 1657 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 VEGFDO43915 354 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 SERPINA1P01009 418 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 CCDC103Q8IW40 242 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 TDHQ8IZJ6 230 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 FAM13CQ8NE31 585 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 GRHL3Q8TE85 626 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 ZDHHC1Q8WTX9 485 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 TESMINQ9Y4I5 508 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 TOP3AQ13472 1001 aaPredicted RBP16.87■□□□□ 0.29
PTPN21-208ENST00000556564 TGFBIQ15582 683 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 PUS10Q3MIT2 529 aaKnown RBP16.87■□□□□ 0.29
PTPN21-208ENST00000556564 FAM92BQ6ZTR7 304 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 RBM15BQ8NDT2 890 aaKnown RBP16.87■□□□□ 0.29
PTPN21-208ENST00000556564 LPGAT1Q92604 370 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 TLCD1Q96CP7 247 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 ZNF184Q99676 751 aaPredicted RBP16.87■□□□□ 0.29
PTPN21-208ENST00000556564 KLRF1Q9NZS2 232 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 ZDHHC2Q9UIJ5 367 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 HCN2Q9UL51 889 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 PSAT1Q9Y617 370 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 OR4F3Q6IEY1 312 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 CLVS1Q8IUQ0 354 aaPredicted RBP16.87■□□□□ 0.29
PTPN21-208ENST00000556564 OR2T34Q8NGX1 318 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 FCRL4Q96PJ5 515 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 EBF4Q9BQW3 602 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 TRIM39Q9HCM9 518 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 NUMBLQ9Y6R0 609 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 A0A0U1RQS6 177 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 MYOCOSA0A1B0GUC4 107 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 GLOD5A6NK44 160 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 MGAT3Q09327 533 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 CAND1Q86VP6 1230 aaKnown RBP16.87■□□□□ 0.29
PTPN21-208ENST00000556564 CNTD1Q8N815 330 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 DENND1AQ8TEH3 1009 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 MYDGFQ969H8 173 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 IL17FQ96PD4 163 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 RACGAP1Q9H0H5 632 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 PCDHB3Q9Y5E6 796 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 LCHNA4D1U4 455 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 CAPN8A6NHC0 703 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 RABIFP47224 123 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 SLC30A6Q6NXT4 461 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 C17orf62Q9BQA9 187 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 CRISPLD1Q9H336 500 aa16.87■□□□□ 0.29
PTPN21-208ENST00000556564 NOL6Q9H6R4 1146 aaKnown RBP16.87■□□□□ 0.29
PTPN21-208ENST00000556564 TRAPPC6AO75865 159 aa16.86■□□□□ 0.29
PTPN21-208ENST00000556564 CDH12P55289 794 aa16.86■□□□□ 0.29
PTPN21-208ENST00000556564 SCARB2Q14108 478 aa16.86■□□□□ 0.29
PTPN21-208ENST00000556564 ALKAL1Q6UXT8 129 aa16.86■□□□□ 0.29
PTPN21-208ENST00000556564 PLA2G15Q8NCC3 412 aa16.86■□□□□ 0.29
PTPN21-208ENST00000556564 FAM234BA2RU67 622 aa16.86■□□□□ 0.29
PTPN21-208ENST00000556564 PCDHGA12O60330 932 aa16.86■□□□□ 0.29
PTPN21-208ENST00000556564 PLGP00747 810 aaPredicted RBP16.86■□□□□ 0.29
PTPN21-208ENST00000556564 ARMCX4Q5H9R4 360 aa16.86■□□□□ 0.29
PTPN21-208ENST00000556564 ANKRD26P1Q6NSI1 321 aa16.86■□□□□ 0.29
PTPN21-208ENST00000556564 RPTNQ6XPR3 784 aa16.86■□□□□ 0.29
PTPN21-208ENST00000556564 SIGLEC10Q96LC7 697 aa16.86■□□□□ 0.29
PTPN21-208ENST00000556564 CAPN14A8MX76 684 aa16.86■□□□□ 0.29
PTPN21-208ENST00000556564 CXCR6O00574 342 aa16.86■□□□□ 0.29
PTPN21-208ENST00000556564 P4HA3Q7Z4N8 544 aa16.86■□□□□ 0.29
PTPN21-208ENST00000556564 GLB1L3Q8NCI6 653 aaPredicted RBP16.86■□□□□ 0.29
PTPN21-208ENST00000556564 TRPV3Q8NET8 790 aa16.86■□□□□ 0.29
PTPN21-208ENST00000556564 SLC25A36Q96CQ1 311 aa16.86■□□□□ 0.29
PTPN21-208ENST00000556564 TNFRSF10BO14763 440 aa16.86■□□□□ 0.29
PTPN21-208ENST00000556564 PGM3O95394 542 aa16.86■□□□□ 0.29
PTPN21-208ENST00000556564 TBC1D21Q8IYX1 336 aa16.86■□□□□ 0.29
PTPN21-208ENST00000556564 PGAM4Q8N0Y7 254 aa16.86■□□□□ 0.29
PTPN21-208ENST00000556564 MIEF2Q96C03 454 aa16.86■□□□□ 0.29
PTPN21-208ENST00000556564 PHF11Q9UIL8 331 aa16.86■□□□□ 0.29
PTPN21-208ENST00000556564 POU2F1P14859 743 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 BPIP17213 487 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 PRPS1L1P21108 318 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 CTSKP43235 329 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 ZNF252P-AS1Q0IIN9 211 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 DSC3Q14574 896 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 TBC1D25Q3MII6 688 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 TMEM198Q66K66 360 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 PIGXQ8TBF5 258 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 KCNJ9Q92806 393 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 TP53INP1Q96A56 240 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 KIAA1191Q96A73 305 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 FBRSQ9HAH7 460 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 PRDM8Q9NQV8 689 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 SRRM3A6NNA2 597 aaPredicted RBP16.85■□□□□ 0.29
PTPN21-208ENST00000556564 ENO4A6NNW6 628 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 PTPN5P54829 565 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 HNRNPKP61978 463 aaKnown RBP eCLIP16.85■□□□□ 0.29
PTPN21-208ENST00000556564 SNAPC1Q16533 368 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 EIPR1Q53HC9 387 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 ZNF527Q8NB42 609 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 ZSCAN1Q8NBB4 408 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 GTPBP3Q969Y2 492 aaKnown RBP16.85■□□□□ 0.29
PTPN21-208ENST00000556564 LDAHQ9H6V9 325 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 MARCH5Q9NX47 278 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 ERGIC3Q9Y282 383 aa16.85■□□□□ 0.29
PTPN21-208ENST00000556564 DHRS7Q9Y394 339 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms