RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 AHSGP02765 367 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 C8GP07360 202 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 PSMB5P28074 263 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 FOLR3P41439 243 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 ELK3P41970 407 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 CARSP49589 748 aaKnown RBP12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 EMP3P54852 163 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 TAP2Q03519 686 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 KLRB1Q12918 225 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 SP140Q13342 867 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 CUL1Q13616 776 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 FASTKQ14296 549 aaKnown RBP12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 TEDDM1Q5T9Z0 273 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 C1orf189Q5VU69 101 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 STEAP4Q687X5 459 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 TTLL10Q6ZVT0 673 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 UBE2R2Q712K3 238 aaPredicted RBP12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 RNF44Q7L0R7 432 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 IGDCC3Q8IVU1 814 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 ZNF480Q8WV37 535 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 FKBP10Q96AY3 582 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 CCDC138Q96M89 665 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 KRT12Q99456 494 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 ZFYVE21Q9BQ24 234 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 ACAT2Q9BWD1 397 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 PCBD2Q9H0N5 130 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 CUTCQ9NTM9 273 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 CHMP2BQ9UQN3 213 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 PCDHGB7Q9Y5F8 929 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 HEATR5BQ9P2D3 2071 aa12.6□□□□□ -0.39
HNRNPC-205ENST00000553300 MED13Q9UHV7 2174 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 FAM187AA6NFU0 413 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 ARGFXA6NJG6 315 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 SLC16A5O15375 505 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 KLHL41O60662 606 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 CTSVO60911 334 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 BANF1O75531 89 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 SYF2O95926 243 aaKnown RBP12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 CTSBP07858 339 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 HRH2P25021 359 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 MCM3P25205 808 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 GABRB3P28472 473 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 VSX2P58304 361 aaPredicted RBP12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 ETF1P62495 437 aaKnown RBP12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 WASHC2DQ5SRD0 308 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 ICE2Q659A1 982 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 PRMT9Q6P2P2 845 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 SUSD1Q6UWL2 747 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 ASB18Q6ZVZ8 466 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 OVCH1Q7RTY7 1134 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 PTRH1Q86Y79 214 aaKnown RBP12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 HPS6Q86YV9 775 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 CPNE9Q8IYJ1 553 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 MYO1HQ8N1T3 1032 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 TEX19Q8NA77 164 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 EEF1AKMT1Q8WVE0 214 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 CFAP36Q96G28 342 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 FER1L6-AS2Q96M78 137 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 PLCD4Q9BRC7 762 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 TRIM51Q9BSJ1 452 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 SLC26A1Q9H2B4 701 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 WDR54Q9H977 334 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 NXT1Q9UKK6 140 aaKnown RBP12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 TP53TG5Q9Y2B4 290 aa12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 PTRH2Q9Y3E5 179 aaKnown RBP12.59□□□□□ -0.39
HNRNPC-205ENST00000553300 A0A0J9YVX5 310 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 HYKKA2RU49 373 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 KRT87PA6NCN2 255 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 E7ESA3 106 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 PEX12O00623 359 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 TXNDC9O14530 226 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 F7P08709 466 aaPredicted RBP12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 HIST1H2AGP0C0S8 130 aaPredicted RBP12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 EZRP15311 586 aaKnown RBP12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 HIST1H2ADP20671 130 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 CASQ1P31415 396 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 CASRP41180 1078 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 CCL11P51671 97 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 IL2P60568 153 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 NFKB2Q00653 900 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 CALCOCO2Q13137 446 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 PDAP1Q13442 181 aaKnown RBP12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 TSTA3Q13630 321 aaPredicted RBP12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 MUM1Q2TAK8 710 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 THEMIS2Q5TEJ8 643 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 FAM45BPQ6NSW5 357 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 FBXO42Q6P3S6 717 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 PAQR3Q6TCH7 311 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 PIWIL4Q7Z3Z4 852 aaKnown RBP12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 SPATA4Q8NEY3 305 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 FAM45AQ8TCE6 357 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 HIST1H2AHQ96KK5 128 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 NDNQ99608 321 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 HIST1H2AJQ99878 128 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 ERP44Q9BS26 406 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 H2AFJQ9BTM1 129 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 SLC25A23Q9BV35 468 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 TRIM55Q9BYV6 548 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 TRIM31Q9BZY9 425 aa12.58□□□□□ -0.4
HNRNPC-205ENST00000553300 PARVBQ9HBI1 364 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms