RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 ZNF713Q8N859 430 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 TEX45Q8NA69 505 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 GMCL1P1Q8NEA9 526 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 RLN3Q8WXF3 142 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 IGSF8Q969P0 613 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 CCDC47Q96A33 483 aaKnown RBP4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 TMEM18Q96B42 140 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 C20orf173Q96LM9 149 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 CCDC114Q96M63 670 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 FNBP1Q96RU3 617 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 SLCO5A1Q9H2Y9 848 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 KCNK15Q9H427 330 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 ANKZF1Q9H8Y5 726 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 SPAG4Q9NPE6 437 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 TRPV5Q9NQA5 729 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 HINT3Q9NQE9 182 aaKnown RBP4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 CYSLTR2Q9NS75 346 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 TMEM45AQ9NWC5 275 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 KLHL13Q9P2N7 655 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 CRNNQ9UBG3 495 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 OR14J1Q9UGF5 321 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 PILRBQ9UKJ0 227 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 ADAM21Q9UKJ8 722 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 PAM16Q9Y3D7 125 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 UBE4BO95155 1302 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 ZMYM6O95789 1325 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 FLNAP21333 2647 aaKnown RBP4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 GREB1LQ9C091 1923 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 TRAV34A0A0B4J273 112 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 A0A1W2PR77 199 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 CPED1A4D0V7 1026 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 WIPF3A6NGB9 483 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 URADA6NGE7 173 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 K7ENP7 123 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 CEBPBP17676 345 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 CERS1P27544 350 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 TNFSF8P32971 234 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 AVPR1AP37288 418 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 BMXP51813 675 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 ZNF75DP51815 510 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 INHBCP55103 352 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 ECT2LQ008S8 904 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 CAPSQ13938 189 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 DMC1Q14565 340 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 PTPRCAPQ14761 206 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 ASIC2Q16515 512 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 ZXDCQ2QGD7 858 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 MIDNQ504T8 468 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 ZNF805Q5CZA5 627 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 C6orf10Q5SRN2 563 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 LRIF1Q5T3J3 769 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 KRT39Q6A163 491 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 MIS18BP1Q6P0N0 1132 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 SLC2A7Q6PXP3 512 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 DEF8Q6ZN54 512 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 INTS8Q75QN2 995 aaKnown RBP4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 ECHDC2Q86YB7 292 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 C10orf53Q8N6V4 93 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 CAMKVQ8NCB2 501 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 SEMA6DQ8NFY4 1073 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 RPLP0P6Q8NHW5 317 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 SPATA3Q8NHX4 192 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 TAAR1Q96RJ0 339 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 GFM1Q96RP9 751 aaKnown RBP4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 IWS1Q96ST2 819 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 AGAP2Q99490 1192 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 SLX1AQ9BQ83 275 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 SH2D3AQ9BRG2 576 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 KLHL31Q9H511 634 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 SLITRK6Q9H5Y7 841 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 CHMP1AQ9HD42 196 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 MLXIPLQ9NP71 852 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 ASB6Q9NWX5 421 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 CISD1Q9NZ45 108 aaKnown RBP4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 ARPP21Q9UBL0 812 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 ACAD8Q9UKU7 415 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 TTC7AQ9ULT0 858 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 SRPRBQ9Y5M8 271 aaKnown RBP4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 STON1Q9Y6Q2 735 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 ZFC3H1O60293 1989 aaKnown RBP4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 ESPL1Q14674 2120 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 BAZ2BQ9UIF8 2168 aaKnown RBP4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 ACANP16112 2415 aa4.6□□□□□ -1.67
HMGB1P23-201ENST00000518743 BSNQ9UPA5 3926 aa4.59□□□□□ -1.67
HMGB1P23-201ENST00000518743 MYBPHLA2RUH7 354 aa4.59□□□□□ -1.67
HMGB1P23-201ENST00000518743 ANXA2P2A6NMY6 339 aa4.59□□□□□ -1.67
HMGB1P23-201ENST00000518743 WNT9BO14905 357 aa4.59□□□□□ -1.67
HMGB1P23-201ENST00000518743 FLRT2O43155 660 aa4.59□□□□□ -1.67
HMGB1P23-201ENST00000518743 SLC7A4O43246 635 aa4.59□□□□□ -1.67
HMGB1P23-201ENST00000518743 TSPAN1O60635 241 aa4.59□□□□□ -1.67
HMGB1P23-201ENST00000518743 RSL1D1O76021 490 aaKnown RBP4.59□□□□□ -1.67
HMGB1P23-201ENST00000518743 LINGO3P0C6S8 592 aa4.59□□□□□ -1.67
HMGB1P23-201ENST00000518743 PFKFB1P16118 471 aa4.59□□□□□ -1.67
HMGB1P23-201ENST00000518743 PRLRP16471 622 aa4.59□□□□□ -1.67
HMGB1P23-201ENST00000518743 STMN1P16949 149 aa4.59□□□□□ -1.67
HMGB1P23-201ENST00000518743 MAOAP21397 527 aa4.59□□□□□ -1.67
HMGB1P23-201ENST00000518743 FCARP24071 287 aa4.59□□□□□ -1.67
HMGB1P23-201ENST00000518743 NR2F2P24468 414 aa4.59□□□□□ -1.67
HMGB1P23-201ENST00000518743 FASLGP48023 281 aa4.59□□□□□ -1.67
HMGB1P23-201ENST00000518743 ID2Q02363 134 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms