RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 DTX1Q86Y01 620 aa14.42□□□□□ -0.1
RNF4-210ENST00000508235 GPSM1Q86YR5 675 aa14.42□□□□□ -0.1
RNF4-210ENST00000508235 FAM20CQ8IXL6 584 aa14.42□□□□□ -0.1
RNF4-210ENST00000508235 NLGN4XQ8N0W4 816 aa14.42□□□□□ -0.1
RNF4-210ENST00000508235 TCAIMQ8N3R3 496 aa14.42□□□□□ -0.1
RNF4-210ENST00000508235 DNAJC22Q8N4W6 341 aa14.42□□□□□ -0.1
RNF4-210ENST00000508235 ESX1Q8N693 406 aa14.42□□□□□ -0.1
RNF4-210ENST00000508235 NLGN4YQ8NFZ3 816 aaPredicted RBP14.42□□□□□ -0.1
RNF4-210ENST00000508235 OR56A3Q8NH54 315 aa14.42□□□□□ -0.1
RNF4-210ENST00000508235 STAG3L4Q8TBR4 150 aa14.42□□□□□ -0.1
RNF4-210ENST00000508235 NAF1Q96HR8 494 aaKnown RBP14.42□□□□□ -0.1
RNF4-210ENST00000508235 DPH7Q9BTV6 452 aa14.42□□□□□ -0.1
RNF4-210ENST00000508235 DHRS4Q9BTZ2 278 aa14.42□□□□□ -0.1
RNF4-210ENST00000508235 SGPP1Q9BX95 441 aa14.42□□□□□ -0.1
RNF4-210ENST00000508235 ATG10Q9H0Y0 220 aa14.42□□□□□ -0.1
RNF4-210ENST00000508235 FAM60AQ9NP50 221 aa14.42□□□□□ -0.1
RNF4-210ENST00000508235 ABCF3Q9NUQ8 709 aa14.42□□□□□ -0.1
RNF4-210ENST00000508235 PILRAQ9UKJ1 303 aa14.42□□□□□ -0.1
RNF4-210ENST00000508235 IKZF3Q9UKT9 509 aa14.42□□□□□ -0.1
RNF4-210ENST00000508235 PCDHB3Q9Y5E6 796 aa14.42□□□□□ -0.1
RNF4-210ENST00000508235 AP1M2Q9Y6Q5 423 aa14.42□□□□□ -0.1
RNF4-210ENST00000508235 IQANK1A0A1B0GTG1 560 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 SRRM3A6NNA2 597 aaPredicted RBP14.41□□□□□ -0.1
RNF4-210ENST00000508235 CPNE3O75131 537 aaKnown RBP14.41□□□□□ -0.1
RNF4-210ENST00000508235 SCRG1O75711 98 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 OR2B3O76000 313 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 KIAA0754O94854 1291 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 ALDOAP04075 364 aaKnown RBP14.41□□□□□ -0.1
RNF4-210ENST00000508235 SNRPAP09012 282 aaKnown RBP14.41□□□□□ -0.1
RNF4-210ENST00000508235 CCNYL3P0C7X3 344 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 CSRP3P50461 194 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 UCNP55089 124 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 RELAQ04206 551 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 CLN3Q13286 438 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 NAE1Q13564 534 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 TGFBIQ15582 683 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 ERCC6LQ2NKX8 1250 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 TCTE1Q5JU00 501 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 FCRL6Q6DN72 434 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 PWWP2BQ6NUJ5 590 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 TLDC1Q6P9B6 456 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 LCTLQ6UWM7 567 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 C6orf15Q6UXA7 325 aaPredicted RBP14.41□□□□□ -0.1
RNF4-210ENST00000508235 C17orf64Q86WR6 236 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 SPATA6LQ8N4H0 392 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 IL22RA1Q8N6P7 574 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 ISL2Q96A47 359 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 ALKBH8Q96BT7 664 aaKnown RBP14.41□□□□□ -0.1
RNF4-210ENST00000508235 CABS1Q96KC9 395 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 PLCD4Q9BRC7 762 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 SPRY4Q9C004 299 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 SLC7A5P2Q9GIP4 190 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 VPS11Q9H270 941 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 CNOT10Q9H9A5 744 aaKnown RBP14.41□□□□□ -0.1
RNF4-210ENST00000508235 EURLQ9NYK6 297 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.41□□□□□ -0.1
RNF4-210ENST00000508235 RNF112Q9ULX5 631 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 KLHL20Q9Y2M5 609 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 V9GYY5 206 aaPredicted RBP14.41□□□□□ -0.1
RNF4-210ENST00000508235 HEATR5BQ9P2D3 2071 aa14.41□□□□□ -0.1
RNF4-210ENST00000508235 OR2A25A4D2G3 310 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 SYCE1LA8MT33 242 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 RAD1O60671 282 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 SRPX2O60687 465 aaPredicted RBP14.4□□□□□ -0.1
RNF4-210ENST00000508235 KLHL2O95198 593 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 DLGAP3O95886 979 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 KLK3P07288 261 aaPredicted RBP14.4□□□□□ -0.1
RNF4-210ENST00000508235 COL6A2P12110 1019 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 EZRP15311 586 aaKnown RBP14.4□□□□□ -0.1
RNF4-210ENST00000508235 TFEBP19484 476 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 GABRA4P48169 554 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 ACAP2Q15057 778 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 SULT1C3Q6IMI6 304 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 ISCA2Q86U28 154 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 MCATQ8IVS2 390 aaKnown RBP14.4□□□□□ -0.1
RNF4-210ENST00000508235 SPACA3Q8IXA5 215 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 CACNA2D3Q8IZS8 1091 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 OR1L3Q8NH93 324 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 RHEBL1Q8TAI7 183 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 NKD1Q969G9 470 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 KIAA1143Q96AT1 154 aaPredicted RBP14.4□□□□□ -0.1
RNF4-210ENST00000508235 RHBDF1Q96CC6 855 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 TSNARE1Q96NA8 513 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 LRFN5Q96NI6 719 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 ZFYVE21Q9BQ24 234 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 EFHD1Q9BUP0 239 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 UNKQ9C0B0 810 aaKnown RBP14.4□□□□□ -0.1
RNF4-210ENST00000508235 EPB41L4BQ9H329 900 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 SLC6A20Q9NP91 592 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 IGSF5Q9NSI5 407 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 TMEM184CQ9NVA4 438 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 IRAK4Q9NWZ3 460 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 PSMC3IPQ9P2W1 217 aaPredicted RBP14.4□□□□□ -0.1
RNF4-210ENST00000508235 SRPK3Q9UPE1 567 aa14.4□□□□□ -0.1
RNF4-210ENST00000508235 URB1O60287 2271 aaKnown RBP14.39□□□□□ -0.11
RNF4-210ENST00000508235 TRIM49D1C9J1S8 452 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 ZSCAN9O15535 394 aaPredicted RBP14.39□□□□□ -0.11
RNF4-210ENST00000508235 KERAO60938 352 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 IPO13O94829 963 aaKnown RBP14.39□□□□□ -0.11
RNF4-210ENST00000508235 TIAF1O95411 115 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms