RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 LRIG3Q6UXM1 1119 aa14.39□□□□□ -0.11
CDC42SE1-203ENST00000470278 CYP4X1Q8N118 509 aa14.39□□□□□ -0.11
CDC42SE1-203ENST00000470278 C2orf73Q8N5S3 287 aaPredicted RBP14.39□□□□□ -0.11
CDC42SE1-203ENST00000470278 BMPERQ8N8U9 685 aa14.39□□□□□ -0.11
CDC42SE1-203ENST00000470278 C19orf47Q8N9M1 422 aaKnown RBP14.39□□□□□ -0.11
CDC42SE1-203ENST00000470278 PPFIBP2Q8ND30 876 aa14.39□□□□□ -0.11
CDC42SE1-203ENST00000470278 OR2L3Q8NG85 312 aa14.39□□□□□ -0.11
CDC42SE1-203ENST00000470278 RHBDF1Q96CC6 855 aa14.39□□□□□ -0.11
CDC42SE1-203ENST00000470278 PPM1MQ96MI6 270 aa14.39□□□□□ -0.11
CDC42SE1-203ENST00000470278 TSNARE1Q96NA8 513 aa14.39□□□□□ -0.11
CDC42SE1-203ENST00000470278 TRAPPC9Q96Q05 1148 aa14.39□□□□□ -0.11
CDC42SE1-203ENST00000470278 POLR1BQ9H9Y6 1135 aa14.39□□□□□ -0.11
CDC42SE1-203ENST00000470278 INTS7Q9NVH2 962 aaKnown RBP14.39□□□□□ -0.11
CDC42SE1-203ENST00000470278 ARGLU1Q9NWB6 273 aaPredicted RBP14.39□□□□□ -0.11
CDC42SE1-203ENST00000470278 ANKMY1Q9P2S6 941 aa14.39□□□□□ -0.11
CDC42SE1-203ENST00000470278 MAST4O15021 2626 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 SLC9B1P1A6NJY1 282 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 A8MU76 341 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 TARM1B6A8C7 271 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 KLK8O60259 260 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 DXOO77932 396 aaKnown RBP14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 PRB1P04280 392 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 RBP1P09455 135 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 PYGBP11216 843 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 MTHFD2P13995 350 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 PSMB5P28074 263 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 SLC6A12P48065 614 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 GLRBP48167 497 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 PRDX1Q06830 199 aaKnown RBP14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 SF1Q15637 639 aaKnown RBP14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 PRAMEF13Q5VWM6 474 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 ICE2Q659A1 982 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 CAPN13Q6MZZ7 669 aaPredicted RBP14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 CYB5D1Q6P9G0 228 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 SUSD1Q6UWL2 747 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 LCTLQ6UWM7 567 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 TRIM73Q86UV7 250 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 FBXO39Q8N4B4 442 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 UBTD2Q8WUN7 234 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 NXPE2Q96DL1 559 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 TCTN2Q96GX1 697 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 PRR11Q96HE9 360 aaPredicted RBP14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 ZIM3Q96PE6 472 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 EGFL8Q99944 293 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 MRPL57Q9BQC6 102 aaKnown RBP14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 B3GNT4Q9C0J1 378 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 CNOT10Q9H9A5 744 aaKnown RBP14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 MKS1Q9NXB0 559 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 XPR1Q9UBH6 696 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 TAC3Q9UHF0 121 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 SATB2Q9UPW6 733 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 MYO18BQ8IUG5 2567 aa14.38□□□□□ -0.11
CDC42SE1-203ENST00000470278 A0A1W2PPM1 405 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 TLDC2A0PJX2 215 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 GLRA3O75311 464 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 S100BP04271 92 aaPredicted RBP14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 MAGP20916 626 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 CMPK1P30085 196 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 KCNC1P48547 511 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 SEPHS1P49903 392 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 RAB15P59190 212 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 MC2RQ01718 297 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 NAE1Q13564 534 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 PTCHD3Q3KNS1 767 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 KRT71Q3SY84 523 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 C3orf38Q5JPI3 329 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 KIAA1614Q5VZ46 1190 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 PCSK4Q6UW60 755 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 TRABD2AQ86V40 505 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 LSMEM2Q8N112 164 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 ZUFSPQ96AP4 578 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 MED8Q96G25 268 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 MIPEPQ99797 713 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 TMEM79Q9BSE2 394 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 HAUS8Q9BT25 410 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 ATG10Q9H0Y0 220 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 MRPL46Q9H2W6 279 aaKnown RBP14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 PRORYQ9H606 182 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 PDE7BQ9NP56 450 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 ZNF358Q9NW07 568 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 SOHLH2Q9NX45 425 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 CD274Q9NZQ7 290 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 SENP1Q9P0U3 644 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 DCDC2Q9UHG0 476 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 PTBP2Q9UKA9 531 aaKnown RBP14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 TMCO1Q9UM00 188 aa14.37□□□□□ -0.11
CDC42SE1-203ENST00000470278 PCM1Q15154 2024 aa14.36□□□□□ -0.11
CDC42SE1-203ENST00000470278 OR2A25A4D2G3 310 aa14.36□□□□□ -0.11
CDC42SE1-203ENST00000470278 NCF1BA6NI72 391 aaPredicted RBP14.36□□□□□ -0.11
CDC42SE1-203ENST00000470278 EFCAB7A8K855 629 aa14.36□□□□□ -0.11
CDC42SE1-203ENST00000470278 NCF1CA8MVU1 366 aaPredicted RBP14.36□□□□□ -0.11
CDC42SE1-203ENST00000470278 GOLGA8RI6L899 631 aa14.36□□□□□ -0.11
CDC42SE1-203ENST00000470278 UBXN8O00124 270 aa14.36□□□□□ -0.11
CDC42SE1-203ENST00000470278 TK2O00142 265 aa14.36□□□□□ -0.11
CDC42SE1-203ENST00000470278 MAP3K7O43318 606 aa14.36□□□□□ -0.11
CDC42SE1-203ENST00000470278 JMJD7P0C870 316 aa14.36□□□□□ -0.11
CDC42SE1-203ENST00000470278 FGF3P11487 239 aaPredicted RBP14.36□□□□□ -0.11
CDC42SE1-203ENST00000470278 NCF1P14598 390 aaPredicted RBP14.36□□□□□ -0.11
CDC42SE1-203ENST00000470278 PVRP15151 417 aa14.36□□□□□ -0.11
CDC42SE1-203ENST00000470278 KRT4P19013 534 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms