RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 INTS11Q5TA45 600 aaKnown RBP14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 TMEM214Q6NUQ4 689 aaKnown RBP14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 PAPD5Q8NDF8 572 aaKnown RBP14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 OR2T12Q8NG77 320 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 OR8J3Q8NGG0 315 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 GIPC3Q8TF64 312 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 ASZ1Q8WWH4 475 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 ARRDC3Q96B67 414 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 MED8Q96G25 268 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 MTERF1Q99551 399 aaKnown RBP14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 ANKRD60Q9BZ19 345 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 MUC13Q9H3R2 512 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 TSC22D4Q9Y3Q8 395 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 HNRNPA1P09651 372 aaKnown RBP eCLIP14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 EN2P19622 333 aaPredicted RBP14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 S100A1P23297 94 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 PTPN6P29350 595 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 HNMTP50135 292 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 CDH15P55291 814 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 MAD2L1Q13257 205 aaPredicted RBP14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 CDKL4Q5MAI5 379 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 FRG2Q64ET8 278 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 ZNF551Q7Z340 670 aaPredicted RBP14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 SPRED1Q7Z699 444 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 RIMKLAQ8IXN7 391 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 ETFBKMTQ8IXQ9 262 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 OFCC1Q8IZS5 231 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 CHCHD4Q8N4Q1 142 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 GOLM1Q8NBJ4 401 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 FBXO30Q8TB52 745 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 MCOLN3Q8TDD5 553 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 BPIFB1Q8TDL5 484 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 SMG7Q92540 1137 aaKnown RBP14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 OTUB2Q96DC9 234 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 FRG2BQ96QU4 278 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 PAIP1Q9H074 479 aaKnown RBP14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 NTN4Q9HB63 628 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 TBC1D23Q9NUY8 699 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 RSL24D1Q9UHA3 163 aaKnown RBP14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 MAGEL2Q9UJ55 1249 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 PCDHB14Q9Y5E9 798 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 PCYT1BQ9Y5K3 369 aaPredicted RBP14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 RNF103-CHMP3A0A140T963 221 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 ETHE1O95571 254 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 SLC16A8O95907 504 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 FTH1P02794 183 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 TCF3P15923 654 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 CDH2P19022 906 aaPredicted RBP14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 IST1P53990 364 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 TMEM115Q12893 351 aaPredicted RBP14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 NAE1Q13564 534 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 FAM78AQ5JUQ0 283 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 XKR5Q6UX68 686 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 C7orf61Q8IZ16 206 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 TCAIMQ8N3R3 496 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 CELF5Q8N6W0 485 aaKnown RBP14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 OR10Q1Q8NGQ4 319 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 OSCP1Q8WVF1 389 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 SAMD11Q96NU1 681 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 ADI1Q9BV57 179 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 STOX2Q9P2F5 926 aaPredicted RBP14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 PRKAG2Q9UGJ0 569 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 PADI4Q9UM07 663 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 SNX6Q9UNH7 406 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 SH2B3Q9UQQ2 575 aa14.73□□□□□ -0.05
SCAMP4-202ENST00000409472 DNAH14Q0VDD8 3507 aa14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 UPK1AO00322 258 aa14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 NPC1O15118 1278 aa14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 PSIP1O75475 530 aaKnown RBP14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 RASAL1O95294 804 aa14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 IL6P05231 212 aa14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 CA3P07451 260 aa14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 GSTT2P0CG29 244 aa14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 GSTT2BP0CG30 244 aa14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 HOXB9P17482 250 aaPredicted RBP14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 EFNA1P20827 205 aaPredicted RBP14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 PRLHRP49683 370 aa14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 NUP107P57740 925 aa14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 PGS1Q32NB8 556 aa14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 AASDHQ4L235 1098 aaPredicted RBP14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 ANKRD26P1Q6NSI1 321 aa14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 TMEM220Q6QAJ8 160 aa14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 GCNT7Q6ZNI0 430 aa14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 THOC6Q86W42 341 aaKnown RBP14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 CACUL1Q86Y37 369 aa14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 MFSD2AQ8NA29 543 aa14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 FBXL8Q96CD0 374 aa14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 CAAP1Q9H8G2 361 aa14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 DKK3Q9UBP4 350 aa14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 ERVK-11Q9UQG0 969 aa14.72□□□□□ -0.05
SCAMP4-202ENST00000409472 SLC5A10A0PJK1 596 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 PABPN1LA6NDY0 278 aaKnown RBP14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 AP2A2O94973 939 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 ANXA6P08133 673 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 CDH1P12830 882 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 AMD1P17707 334 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 IMPA1P29218 277 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 CCR3P51677 355 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 AP1S2P56377 157 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 CLDN8P56748 225 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms