RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 GRM7Q14831 915 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 LARS2Q15031 903 aaKnown RBP12.45□□□□□ -0.42
HERC3-203ENST00000407637 FAM171A1Q5VUB5 890 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 OR2T5Q6IEZ7 315 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 KLHL17Q6TDP4 642 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 ATCAYQ86WG3 371 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 GPALPP1Q8IXQ4 340 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 LRRC71Q8N4P6 559 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 OR2T29Q8NH02 315 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 UPRTQ96BW1 309 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 KIF12Q96FN5 646 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 COL21A1Q96P44 957 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 KCNC2Q96PR1 638 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 FAM129BQ96TA1 746 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 ASB7Q9H672 318 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 QTRT2Q9H974 415 aaKnown RBP12.45□□□□□ -0.42
HERC3-203ENST00000407637 SPASTQ9UBP0 616 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 ZNF225Q9UK10 706 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 CRYL1Q9Y2S2 319 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 CMAHPQ9Y471 501 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 ZNF175Q9Y473 711 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 POLR3HQ9Y535 204 aaPredicted RBP12.45□□□□□ -0.42
HERC3-203ENST00000407637 MAFBQ9Y5Q3 323 aaPredicted RBP12.45□□□□□ -0.42
HERC3-203ENST00000407637 ZNF831Q5JPB2 1677 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 XIRP1Q702N8 1843 aaKnown RBP12.45□□□□□ -0.42
HERC3-203ENST00000407637 M0QYT0 321 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 PMPCBO75439 489 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 OLR1P78380 273 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 LAMTOR4Q0VGL1 99 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 CAMK2GQ13555 558 aaPredicted RBP12.45□□□□□ -0.42
HERC3-203ENST00000407637 C10orf62Q5T681 223 aaPredicted RBP12.45□□□□□ -0.42
HERC3-203ENST00000407637 ZBTB8OSQ8IWT0 167 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 MSRB3Q8IXL7 192 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 TAGAPQ8N103 731 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 EFHBQ8N7U6 833 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 GDPD1Q8N9F7 314 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 C18orf25Q96B23 403 aaPredicted RBP12.45□□□□□ -0.42
HERC3-203ENST00000407637 ZNF419Q96HQ0 510 aaPredicted RBP12.45□□□□□ -0.42
HERC3-203ENST00000407637 C1orf74Q96LT6 269 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 KLHL15Q96M94 604 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 ELOVL6Q9H5J4 265 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 PIGVQ9NUD9 493 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 SLC25A37Q9NYZ2 338 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 SNX10Q9Y5X0 201 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 E9PAM4 449 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 FABP7O15540 132 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 AOC2O75106 756 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 ALDH1A1P00352 501 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 PROS1P07225 676 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 GJB1P08034 283 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 MAP2K3P46734 347 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 SP2Q02086 613 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 SSX1Q16384 188 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 TIMM50Q3ZCQ8 353 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 PYDC2Q56P42 97 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 NIM1KQ8IY84 436 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 SLAIN1Q8ND83 568 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 SIPA1Q96FS4 1042 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 ASIC4Q96FT7 647 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 ZNF599Q96NL3 588 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 WDFY2Q96P53 400 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 C1QTNF6Q9BXI9 259 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 ABCB9Q9NP78 766 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 VPS9D1Q9Y2B5 631 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 TNPO3Q9Y5L0 923 aaKnown RBP12.44□□□□□ -0.42
HERC3-203ENST00000407637 SCN9AQ15858 1988 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 ZNF236Q9UL36 1845 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 NCF1BA6NI72 391 aaPredicted RBP12.44□□□□□ -0.42
HERC3-203ENST00000407637 NCF1CA8MVU1 366 aaPredicted RBP12.44□□□□□ -0.42
HERC3-203ENST00000407637 I6L893 689 aaPredicted RBP12.44□□□□□ -0.42
HERC3-203ENST00000407637 NCAM2O15394 837 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 STAG3L1P0CL83 205 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 NCF1P14598 390 aaPredicted RBP12.44□□□□□ -0.42
HERC3-203ENST00000407637 MAGEA2P43356 314 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 CLCNKAP51800 687 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 RAB25P57735 213 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 ST3GAL4Q11206 333 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 NFE2L1Q14494 772 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 RBBP7Q16576 425 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 C6orf132Q5T0Z8 1188 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 ADGRG3Q86Y34 549 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 KRT73Q86Y46 540 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 FAM181AQ8N9Y4 354 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 ZNF431Q8TF32 576 aaPredicted RBP12.44□□□□□ -0.42
HERC3-203ENST00000407637 SLC13A3Q8WWT9 602 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 RAD9AQ99638 391 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 SERHL2Q9H4I8 314 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 SLC35C2Q9NQQ7 365 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 RGS18Q9NS28 235 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 MRPL39Q9NYK5 338 aaKnown RBP12.44□□□□□ -0.42
HERC3-203ENST00000407637 NLKQ9UBE8 527 aa12.44□□□□□ -0.42
HERC3-203ENST00000407637 SAMHD1Q9Y3Z3 626 aaKnown RBP12.44□□□□□ -0.42
HERC3-203ENST00000407637 NUP214P35658 2090 aaPredicted RBP12.44□□□□□ -0.42
HERC3-203ENST00000407637 M0R129 80 aa12.43□□□□□ -0.42
HERC3-203ENST00000407637 CD3EAPO15446 510 aaKnown RBP12.43□□□□□ -0.42
HERC3-203ENST00000407637 RAF1P04049 648 aa12.43□□□□□ -0.42
HERC3-203ENST00000407637 ADRA2AP08913 450 aa12.43□□□□□ -0.42
HERC3-203ENST00000407637 TSPAN19P0C672 248 aa12.43□□□□□ -0.42
HERC3-203ENST00000407637 ARSBP15848 533 aa12.43□□□□□ -0.42
HERC3-203ENST00000407637 FPR1P21462 350 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms