RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 SLC13A4Q9UKG4 626 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 INTS6Q9UL03 887 aaKnown RBP8.6□□□□□ -1.03
RTN4-206ENST00000394611 ABCG2Q9UNQ0 655 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 A0A0D9SEW6 157 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 EIF3FO00303 357 aaPredicted RBP8.6□□□□□ -1.03
RTN4-206ENST00000394611 FPGTO14772 594 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 DCLK1O15075 740 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 ICMTO60725 284 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 CDRT1O95170 752 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 RPLP0P05388 317 aaKnown RBP8.6□□□□□ -1.03
RTN4-206ENST00000394611 CHRNB1P11230 501 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 EPB42P16452 691 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 DCTP40126 519 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 AP2S1P53680 142 aaPredicted RBP8.6□□□□□ -1.03
RTN4-206ENST00000394611 ACSM2AQ08AH3 577 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 ABRQ12979 859 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 RFTN1Q14699 578 aaPredicted RBP8.6□□□□□ -1.03
RTN4-206ENST00000394611 NDUFA5Q16718 116 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 CLEC12AQ5QGZ9 265 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 ACSM2BQ68CK6 577 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 TPGS1Q6ZTW0 290 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 PLEKHM3Q6ZWE6 761 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 UNC93AQ86WB7 457 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 DENND1CQ8IV53 801 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 ZNF614Q8N883 585 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 TP53I13Q8NBR0 393 aaPredicted RBP8.6□□□□□ -1.03
RTN4-206ENST00000394611 GLB1L3Q8NCI6 653 aaPredicted RBP8.6□□□□□ -1.03
RTN4-206ENST00000394611 TRMOQ9BU70 441 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 POLR2J2Q9GZM3 115 aaKnown RBP8.6□□□□□ -1.03
RTN4-206ENST00000394611 HMX1Q9NP08 348 aaPredicted RBP8.6□□□□□ -1.03
RTN4-206ENST00000394611 MARCH2Q9P0N8 246 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 TMEM9Q9P0T7 183 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 NLKQ9UBE8 527 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 ENPP5Q9UJA9 477 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 IQCMA0A1B0GVH7 501 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 CRYZL1O95825 349 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 PIGRP01833 764 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 TP53P04637 393 aaPredicted RBP8.59□□□□□ -1.03
RTN4-206ENST00000394611 PKMP14618 531 aaKnown RBP8.59□□□□□ -1.03
RTN4-206ENST00000394611 CA5AP35218 305 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 GNPDA1P46926 289 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 MAN2A2P49641 1150 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 ZNF135P52742 658 aaPredicted RBP8.59□□□□□ -1.03
RTN4-206ENST00000394611 GP2P55259 537 aaKnown RBP8.59□□□□□ -1.03
RTN4-206ENST00000394611 DBPQ10586 325 aaPredicted RBP8.59□□□□□ -1.03
RTN4-206ENST00000394611 CDH18Q13634 790 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 HYAL4Q2M3T9 481 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 RBM48Q5RL73 367 aaKnown RBP8.59□□□□□ -1.03
RTN4-206ENST00000394611 LETMD1Q6P1Q0 360 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 TMEM207Q6UWW9 146 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 CASP12Q6UXS9 341 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 PDPRQ8NCN5 879 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 OR4K1Q8NGD4 311 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 ZNF641Q96N77 438 aaPredicted RBP8.59□□□□□ -1.03
RTN4-206ENST00000394611 ZFP3Q96NJ6 502 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 KIFC1Q9BW19 673 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 SLAMF7Q9NQ25 335 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 CRTAC1Q9NQ79 661 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 RABL2AQ9UBK7 228 aaPredicted RBP8.59□□□□□ -1.03
RTN4-206ENST00000394611 TMEM98Q9Y2Y6 226 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 NME7Q9Y5B8 376 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 CACNA1IQ9P0X4 2223 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 PRAMEF33A0A0G2JMD5 474 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 ISPDA4D126 451 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 FAM227AF5H4B4 570 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 F5H5T6 163 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 SCAMP1O15126 338 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 MATN3O15232 486 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 SUV39H1O43463 412 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 GAS2O43903 313 aaKnown RBP8.59□□□□□ -1.03
RTN4-206ENST00000394611 PRAMEF10O60809 474 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 MLYCDO95822 493 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 IL6P05231 212 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 UROSP10746 265 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 SSTR2P30874 369 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 MAGEA3P43357 314 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 KRT6CP48668 564 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 MAPK12P53778 367 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 RPL26P61254 145 aaKnown RBP8.59□□□□□ -1.03
RTN4-206ENST00000394611 IRF8Q02556 426 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 DSC3Q14574 896 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 NCF4Q15080 339 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 FAM187BQ17R55 369 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 ZNF484Q5JVG2 852 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 KIAA0930Q6ICG6 404 aaPredicted RBP8.59□□□□□ -1.03
RTN4-206ENST00000394611 FBXO46Q6PJ61 603 aaPredicted RBP8.59□□□□□ -1.03
RTN4-206ENST00000394611 BCDIN3DQ7Z5W3 292 aaKnown RBP8.59□□□□□ -1.03
RTN4-206ENST00000394611 C2CD4AQ8NCU7 369 aaPredicted RBP8.59□□□□□ -1.03
RTN4-206ENST00000394611 RTP4Q96DX8 246 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 HSH2DQ96JZ2 352 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 C1QTNF1Q9BXJ1 281 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 ITPAQ9BY32 194 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 LINC00597Q9H2U6 94 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 ABCB8Q9NUT2 735 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 GMIPQ9P107 970 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 IL20RAQ9UHF4 553 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 ACSL6Q9UKU0 697 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 OAS3Q9Y6K5 1087 aaKnown RBP8.59□□□□□ -1.03
RTN4-206ENST00000394611 A0A1W2PPK0 400 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 PRR23AA6NEV1 266 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms