RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 TOR1BO14657 336 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 HCN1O60741 890 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 PSIP1O75475 530 aaKnown RBP16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 SNX4O95219 450 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 AZGP1P25311 298 aaKnown RBP16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 DDX6P26196 483 aaKnown RBP eCLIP16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 AGTRAPQ6RW13 159 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 RPTNQ6XPR3 784 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 HERVK_113Q902F9 699 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 CMTM7Q96FZ5 175 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 ART5Q96L15 291 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 C11orf84Q9BUA3 381 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 ANKRA2Q9H9E1 313 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 TAS2R7Q9NYW3 318 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 UPK3BL1B0FP48 263 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 UPK3BL2E5RIL1 263 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 MAFKO60675 156 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 RASGRP1O95267 797 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 RB1P06400 928 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 BCAP31P51572 246 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 GMFBP60983 142 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 PTPRCAPQ14761 206 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 FBXO43Q4G163 708 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 LRRC66Q68CR7 880 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 SLC22A18Q96BI1 424 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 LOC100130705A0A1B0GUX0 176 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 CPN2P22792 545 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 CDK6Q00534 326 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 EIPR1Q53HC9 387 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 CRB2Q5IJ48 1285 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 THOC6Q86W42 341 aaKnown RBP16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 OR4C6Q8NH72 309 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 SMPDL3AQ92484 453 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 LRCH3Q96II8 777 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 LMLNQ96KR4 655 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 RPF2Q9H7B2 306 aaKnown RBP16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 TELO2Q9Y4R8 837 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 SLC31A1O15431 190 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 HOXA11P31270 313 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 TNFAIP8L3Q5GJ75 292 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 LCN1P1Q5VSP4 162 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 C22orf39Q6P5X5 142 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 ASRGL1Q7L266 308 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 CADM2Q8N3J6 435 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 MINDY2Q8NBR6 621 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 RGMAQ96B86 450 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 GIMAP2Q9UG22 337 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 IL36AQ9UHA7 158 aa16.66■□□□□ 0.26
TRAPPC11-201ENST00000334690 M0QX08 132 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 SNNO75324 88 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 CRTC2Q53ET0 693 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 GPRC6AQ5T6X5 926 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 LINC00471Q8N535 108 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 MEIOBQ8N635 442 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 CRELD1Q96HD1 420 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 NARS2Q96I59 477 aaKnown RBP16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 MAGEE1Q9HCI5 957 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 MRPS30Q9NP92 439 aaKnown RBP16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 XKRYO14609 159 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 S1PR4O95977 384 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 HMGN1P05114 100 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 CD1DP15813 335 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 ARSFP54793 590 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 PPP1R8Q12972 351 aaKnown RBP16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 TUBA3CQ13748 450 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 SYT16Q17RD7 645 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 NANOGP8Q6NSW7 305 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 KBTBD7Q8WVZ9 684 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 KAT2AQ92830 837 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 UFD1Q92890 307 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 SRMSQ9H3Y6 488 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 NANOGQ9H9S0 305 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 P2RX2Q9UBL9 471 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 MYH7P12883 1935 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 A0A0D9SEW6 157 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 MXD1Q05195 221 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 C10orf62Q5T681 223 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 CXorf57Q6NSI4 855 aaKnown RBP16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 CNPPD1Q9BV87 410 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 SNX7Q9UNH6 387 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 CICQ96RK0 1608 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 SAP18O00422 153 aaKnown RBP16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 TBX1O43435 398 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 NDUFS1P28331 727 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 RYKP34925 604 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 PPP1R3AQ16821 1122 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 JAZF1Q86VZ6 243 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 COX18Q8N8Q8 333 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 GOLM1Q8NBJ4 401 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 OR10H5Q8NGA6 315 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 TMEM174Q8WUU8 243 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 ZFAND2BQ8WV99 257 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 WDR26Q9H7D7 661 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 RNF11Q9Y3C5 154 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 LAMB4A4D0S4 1761 aa16.65■□□□□ 0.26
TRAPPC11-201ENST00000334690 MYH13Q9UKX3 1938 aa16.64■□□□□ 0.26
TRAPPC11-201ENST00000334690 POP7O75817 140 aaKnown RBP16.64■□□□□ 0.25
TRAPPC11-201ENST00000334690 OAS1P00973 400 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms