RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 SNX9Q9Y5X1 595 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 NFS1Q9Y697 457 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 STON1Q9Y6Q2 735 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 UNC79Q9P2D8 2635 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 ATXN2Q99700 1313 aaKnown RBP3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 MYO16Q9Y6X6 1858 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 RALGAPA1Q6GYQ0 2036 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 PTPRZ1P23471 2315 aaPredicted RBP3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 PKD1L2Q7Z442 2459 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 FAM237AA0A1B0GTK4 181 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 PVALEFA0A1B0GWK0 134 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 A0A1W2PPH5 198 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 TMEM202A6NGA9 273 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 ANKRD63C9JTQ0 380 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 ZNF197O14709 1029 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 EIF3DO15371 548 aaKnown RBP eCLIP3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 ADAM12O43184 909 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 NDUFS7O75251 213 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 HOXB5P09067 269 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 ADSSP30520 456 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 CDAP32320 146 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 ELF1P32519 619 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 TNFSF9P41273 254 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 MATR3P43243 847 aaKnown RBP eCLIP3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 HARS2P49590 506 aaKnown RBP3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 SORDQ00796 357 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 ROR1Q01973 937 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 CEBPZQ03701 1054 aaKnown RBP3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 YWHAHQ04917 246 aaPredicted RBP3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 SMARCB1Q12824 385 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 GPR17Q13304 367 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 HTR4Q13639 388 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 KIF19Q2TAC6 998 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 AMZ1Q400G9 498 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 ZC2HC1CQ53FD0 456 aaPredicted RBP3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 PPP6R3Q5H9R7 873 aaPredicted RBP3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 PPM1LQ5SGD2 360 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 C9orf57Q5W0N0 161 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 RESP18Q5W5W9 173 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 ADALQ6DHV7 355 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 JADE1Q6IE81 842 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 ZNF280DQ6N043 979 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 RHBDF2Q6PJF5 856 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 STXBP4Q6ZWJ1 553 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 BHLHA9Q7RTU4 235 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 CCDC65Q8IXS2 484 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 LEMD2Q8NC56 503 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 CREB3L4Q8TEY5 395 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 C18orf25Q96B23 403 aaPredicted RBP3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 FAM122AQ96E09 287 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 BICD1Q96G01 975 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 ACCSQ96QU6 501 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 MYADMQ96S97 322 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 KRTAP1-5Q9BYS1 174 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 KCNN2Q9H2S1 579 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 ESRP2Q9H6T0 727 aaKnown RBP3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 TMEM206Q9H813 350 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 PANK4Q9NVE7 773 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 GDE1Q9NZC3 331 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 WWOXQ9NZC7 414 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 CGNQ9P2M7 1197 aaKnown RBP3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 TUBGCP4Q9UGJ1 667 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 SLCO3A1Q9UIG8 710 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 HAO1Q9UJM8 370 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 FBXL5Q9UKA1 691 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 INTS6Q9UL03 887 aaKnown RBP3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 CDH7Q9ULB5 785 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 ASB3Q9Y575 518 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 SPTBN4Q9H254 2564 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 UBE4BO95155 1302 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 ZNF292O60281 2723 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 KIAA1549LQ6ZVL6 1849 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 MYO18AQ92614 2054 aaKnown RBP3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 ATG2BQ96BY7 2078 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 MYOFQ9NZM1 2061 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 OTOGLQ3ZCN5 2332 aa3.58□□□□□ -1.84
CKS1BP3-201ENST00000600888 I3L4J1 428 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 J3KRW8 73 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 POLR2DO15514 142 aaKnown RBP3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 TGFB1I1O43294 461 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 EXTL3O43909 919 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 ECI2O75521 394 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 GCNT3O95395 438 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 SEC24AO95486 1093 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 HSP90AA1P07900 732 aaKnown RBP3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 CYC1P08574 325 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 G6PDP11413 515 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 ODC1P11926 461 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 DAOP14920 347 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 AOC1P19801 751 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 CMA1P23946 247 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 HOXD13P35453 343 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 KRT9P35527 623 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 EIF2S3P41091 472 aaKnown RBP3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 ACOT2P49753 483 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 TAF6P49848 677 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 RAD23BP54727 409 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 STARD6P59095 220 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 ECT2LQ008S8 904 aa3.57□□□□□ -1.84
CKS1BP3-201ENST00000600888 EML5Q05BV3 1969 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms