RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 CALCOCO2Q13137 446 aa16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 TMED2Q15363 201 aa16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 TYSND1Q2T9J0 566 aa16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 BBS9Q3SYG4 887 aa16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 MLIPQ5VWP3 458 aa16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 MRPL14Q6P1L8 145 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 TLDC1Q6P9B6 456 aa16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 TRIM73Q86UV7 250 aa16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 GALNT16Q8N428 558 aa16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 OR5K2Q8NHB8 316 aa16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 ASZ1Q8WWH4 475 aa16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 ZNF592Q92610 1267 aa16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 EBNA1BP2Q99848 306 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 ERP44Q9BS26 406 aa16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 SPRTNQ9H040 489 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 ZNF552Q9H707 407 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 C20orf96Q9NUD7 363 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 INTS10Q9NVR2 710 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 MAP10Q9P2G4 905 aa16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 IFT80Q9P2H3 777 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 PTRH2Q9Y3E5 179 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 A0A0J9YY10 115 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 ZCWPW2A0A1B0GU75 182 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 SLC5A10A0PJK1 596 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 GOLGA8KD6RF30 607 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 GOLGA8TH3BQL2 631 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 KDM1AO60341 852 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 ESR1P03372 595 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 TPBGLP0DKB5 382 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 ADARP55265 1226 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 EIF3BP55884 814 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 DHX9Q08211 1270 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 C2orf54Q08AI8 447 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 NR6A1Q15406 480 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 HIF1AQ16665 826 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 KYNUQ16719 465 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 WHAMMP3Q1A5X7 153 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 DEFB110Q30KQ9 67 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 CRB2Q5IJ48 1285 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 SPANXN3Q5MJ09 141 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 C1orf189Q5VU69 101 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 ZNF572Q7Z3I7 529 aaPredicted RBP16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 DNAJC22Q8N4W6 341 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 GSDMBQ8TAX9 411 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 TM9SF4Q92544 642 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 NACC2Q96BF6 587 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 PTERQ96BW5 349 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 BARD1Q99728 777 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 FAM167BQ9BTA0 163 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 P2RY12Q9H244 342 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 P4HTMQ9NXG6 502 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 SPHK1Q9NYA1 384 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 NDOR1Q9UHB4 597 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 SNX24Q9Y343 169 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 UTP11Q9Y3A2 253 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 ICE1Q9Y2F5 2266 aa16.87■□□□□ 0.29
SHKBP1-203ENST00000594298 A1L4Q6 167 aa16.86■□□□□ 0.29
SHKBP1-203ENST00000594298 BHMG1C9JSJ3 638 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-203ENST00000594298 FMO4P31512 558 aa16.86■□□□□ 0.29
SHKBP1-203ENST00000594298 BRD3Q15059 726 aa16.86■□□□□ 0.29
SHKBP1-203ENST00000594298 SLC5A12Q1EHB4 618 aa16.86■□□□□ 0.29
SHKBP1-203ENST00000594298 MAMDC2Q7Z304 686 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-203ENST00000594298 PPP1R32Q7Z5V6 425 aa16.86■□□□□ 0.29
SHKBP1-203ENST00000594298 CILP2Q8IUL8 1156 aa16.86■□□□□ 0.29
SHKBP1-203ENST00000594298 CISD2Q8N5K1 135 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-203ENST00000594298 RAB17Q9H0T7 212 aa16.86■□□□□ 0.29
SHKBP1-203ENST00000594298 TXLNGQ9NUQ3 528 aa16.86■□□□□ 0.29
SHKBP1-203ENST00000594298 ASF1BQ9NVP2 202 aa16.86■□□□□ 0.29
SHKBP1-203ENST00000594298 WHRNQ9P202 907 aa16.86■□□□□ 0.29
SHKBP1-203ENST00000594298 DHCR7Q9UBM7 475 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-203ENST00000594298 ERRFI1Q9UJM3 462 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-203ENST00000594298 PLCL2Q9UPR0 1127 aa16.86■□□□□ 0.29
SHKBP1-203ENST00000594298 TEX15Q9BXT5 2789 aa16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 RAD51CO43502 376 aa16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 CNOT3O75175 753 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 LDLRP01130 860 aa16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 CTSBP07858 339 aa16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 UMODP07911 640 aa16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 CCR7P32248 378 aa16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 RPL21P46778 160 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 GCGRP47871 477 aa16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 HSPA14Q0VDF9 509 aa16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 KIR2DS3Q14952 304 aa16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 NKAIN1Q4KMZ8 207 aa16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 ZNF470Q6ECI4 717 aa16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 Q6ZS92 163 aa16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 KCNMB4Q86W47 210 aa16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 AGGF1Q8N302 714 aaeCLIP16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 ZNF655Q8N720 491 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 MNS1Q8NEH6 495 aa16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 LPGAT1Q92604 370 aa16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 TRIM56Q9BRZ2 755 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 ILKAPQ9H0C8 392 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 CCDC68Q9H2F9 335 aa16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 CDYLQ9Y232 598 aa16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 SLC5A6Q9Y289 635 aa16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 UTP20O75691 2785 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 SPTBN1Q01082 2364 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-203ENST00000594298 UNC79Q9P2D8 2635 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms