RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 KIRREL2Q6UWL6 708 aa20.83■□□□□ 0.93
DDX39A-215ENST00000590696 OTOAQ7RTW8 1153 aa20.83■□□□□ 0.93
DDX39A-215ENST00000590696 RAB42Q8N4Z0 105 aa20.83■□□□□ 0.93
DDX39A-215ENST00000590696 MIPEPQ99797 713 aa20.83■□□□□ 0.93
DDX39A-215ENST00000590696 MRM3Q9HC36 420 aaKnown RBP20.83■□□□□ 0.93
DDX39A-215ENST00000590696 EIF2B3Q9NR50 452 aaKnown RBP20.83■□□□□ 0.93
DDX39A-215ENST00000590696 IL1RAPL1Q9NZN1 696 aa20.83■□□□□ 0.93
DDX39A-215ENST00000590696 CTSFQ9UBX1 484 aa20.83■□□□□ 0.93
DDX39A-215ENST00000590696 CSAG2Q9Y5P2 127 aa20.83■□□□□ 0.93
DDX39A-215ENST00000590696 MRFAP1Q9Y605 127 aa20.83■□□□□ 0.93
DDX39A-215ENST00000590696 TEX15Q9BXT5 2789 aa20.83■□□□□ 0.92
DDX39A-215ENST00000590696 FITM1A5D6W6 292 aa20.82■□□□□ 0.92
DDX39A-215ENST00000590696 WIPF3A6NGB9 483 aa20.82■□□□□ 0.92
DDX39A-215ENST00000590696 SRPX2O60687 465 aaPredicted RBP20.82■□□□□ 0.92
DDX39A-215ENST00000590696 LDLRP01130 860 aa20.82■□□□□ 0.92
DDX39A-215ENST00000590696 RPS3P23396 243 aaKnown RBP eCLIP20.82■□□□□ 0.92
DDX39A-215ENST00000590696 NPY2RP49146 381 aa20.82■□□□□ 0.92
DDX39A-215ENST00000590696 EIF3BP55884 814 aaKnown RBP20.82■□□□□ 0.92
DDX39A-215ENST00000590696 ELOAQ14241 798 aaKnown RBP20.82■□□□□ 0.92
DDX39A-215ENST00000590696 SIX1Q15475 284 aaPredicted RBP20.82■□□□□ 0.92
DDX39A-215ENST00000590696 CCNG2Q16589 344 aa20.82■□□□□ 0.92
DDX39A-215ENST00000590696 HIF1AQ16665 826 aa20.82■□□□□ 0.92
DDX39A-215ENST00000590696 FRMPD2BQ6IN97 320 aa20.82■□□□□ 0.92
DDX39A-215ENST00000590696 CNSTQ6PJW8 725 aa20.82■□□□□ 0.92
DDX39A-215ENST00000590696 LRRC6Q86X45 466 aa20.82■□□□□ 0.92
DDX39A-215ENST00000590696 GAS2L3Q86XJ1 694 aa20.82■□□□□ 0.92
DDX39A-215ENST00000590696 PARP9Q8IXQ6 854 aa20.82■□□□□ 0.92
DDX39A-215ENST00000590696 MPP5Q8N3R9 675 aa20.82■□□□□ 0.92
DDX39A-215ENST00000590696 DTWD1Q8N5C7 304 aa20.82■□□□□ 0.92
DDX39A-215ENST00000590696 UBE2Q2Q8WVN8 375 aa20.82■□□□□ 0.92
DDX39A-215ENST00000590696 FOPNLQ96NB1 174 aa20.82■□□□□ 0.92
DDX39A-215ENST00000590696 WDR77Q9BQA1 342 aaPredicted RBP20.82■□□□□ 0.92
DDX39A-215ENST00000590696 TSGA10Q9BZW7 698 aa20.82■□□□□ 0.92
DDX39A-215ENST00000590696 IL22Q9GZX6 179 aa20.82■□□□□ 0.92
DDX39A-215ENST00000590696 NXT1Q9UKK6 140 aaKnown RBP20.82■□□□□ 0.92
DDX39A-215ENST00000590696 MAU2Q9Y6X3 613 aa20.82■□□□□ 0.92
DDX39A-215ENST00000590696 BASP1P80723 227 aaKnown RBP20.81■□□□□ 0.92
DDX39A-215ENST00000590696 RPS6KA1Q15418 735 aa20.81■□□□□ 0.92
DDX39A-215ENST00000590696 RBBP7Q16576 425 aa20.81■□□□□ 0.92
DDX39A-215ENST00000590696 TUBB8Q3ZCM7 444 aa20.81■□□□□ 0.92
DDX39A-215ENST00000590696 CTSL3PQ5NE16 218 aa20.81■□□□□ 0.92
DDX39A-215ENST00000590696 MEI1Q5TIA1 1274 aa20.81■□□□□ 0.92
DDX39A-215ENST00000590696 AGAP7PQ5VUJ5 663 aa20.81■□□□□ 0.92
DDX39A-215ENST00000590696 IRAK1BP1Q5VVH5 260 aa20.81■□□□□ 0.92
DDX39A-215ENST00000590696 OTUD6BQ8N6M0 293 aa20.81■□□□□ 0.92
DDX39A-215ENST00000590696 OR2L3Q8NG85 312 aa20.81■□□□□ 0.92
DDX39A-215ENST00000590696 OR2A1Q8NGT9 310 aa20.81■□□□□ 0.92
DDX39A-215ENST00000590696 HMGCLL1Q8TB92 370 aa20.81■□□□□ 0.92
DDX39A-215ENST00000590696 PPP4R1Q8TF05 950 aa20.81■□□□□ 0.92
DDX39A-215ENST00000590696 AGAP4Q96P64 663 aa20.81■□□□□ 0.92
DDX39A-215ENST00000590696 BARD1Q99728 777 aaKnown RBP20.81■□□□□ 0.92
DDX39A-215ENST00000590696 SEMA3GQ9NS98 782 aa20.81■□□□□ 0.92
DDX39A-215ENST00000590696 BFARQ9NZS9 450 aa20.81■□□□□ 0.92
DDX39A-215ENST00000590696 ZC3H7BQ9UGR2 993 aaKnown RBP20.81■□□□□ 0.92
DDX39A-215ENST00000590696 SLC5A6Q9Y289 635 aa20.81■□□□□ 0.92
DDX39A-215ENST00000590696 DRG1Q9Y295 367 aaKnown RBP20.81■□□□□ 0.92
DDX39A-215ENST00000590696 KLK4Q9Y5K2 254 aa20.81■□□□□ 0.92
DDX39A-215ENST00000590696 FAM169AQ9Y6X4 670 aa20.81■□□□□ 0.92
DDX39A-215ENST00000590696 LOC105369274A0A096LPK9 316 aa20.8■□□□□ 0.92
DDX39A-215ENST00000590696 LOC102723532A0A0G2JNH3 316 aa20.8■□□□□ 0.92
DDX39A-215ENST00000590696 A0A0J9YVX5 310 aa20.8■□□□□ 0.92
DDX39A-215ENST00000590696 HYKKA2RU49 373 aa20.8■□□□□ 0.92
DDX39A-215ENST00000590696 VSTM2BA6NLU5 285 aa20.8■□□□□ 0.92
DDX39A-215ENST00000590696 NRP2O60462 931 aa20.8■□□□□ 0.92
DDX39A-215ENST00000590696 MED26O95402 600 aa20.8■□□□□ 0.92
DDX39A-215ENST00000590696 CLDN1O95832 211 aa20.8■□□□□ 0.92
DDX39A-215ENST00000590696 FMO4P31512 558 aa20.8■□□□□ 0.92
DDX39A-215ENST00000590696 CCNFP41002 786 aa20.8■□□□□ 0.92
DDX39A-215ENST00000590696 IGFL2Q6UWQ7 119 aa20.8■□□□□ 0.92
DDX39A-215ENST00000590696 C4orf22Q6V702 233 aa20.8■□□□□ 0.92
DDX39A-215ENST00000590696 MAMDC2Q7Z304 686 aaPredicted RBP20.8■□□□□ 0.92
DDX39A-215ENST00000590696 OR4N4Q8N0Y3 316 aa20.8■□□□□ 0.92
DDX39A-215ENST00000590696 DNAJB14Q8TBM8 379 aa20.8■□□□□ 0.92
DDX39A-215ENST00000590696 MAGEC3Q8TD91 643 aa20.8■□□□□ 0.92
DDX39A-215ENST00000590696 C5orf34Q96MH7 638 aa20.8■□□□□ 0.92
DDX39A-215ENST00000590696 BIRC8Q96P09 236 aa20.8■□□□□ 0.92
DDX39A-215ENST00000590696 LHPPQ9H008 270 aa20.8■□□□□ 0.92
DDX39A-215ENST00000590696 ZNF304Q9HCX3 659 aa20.8■□□□□ 0.92
DDX39A-215ENST00000590696 AGPAT4Q9NRZ5 378 aa20.8■□□□□ 0.92
DDX39A-215ENST00000590696 TSR3Q9UJK0 312 aaKnown RBP20.8■□□□□ 0.92
DDX39A-215ENST00000590696 NOVA2Q9UNW9 492 aaKnown RBP20.8■□□□□ 0.92
DDX39A-215ENST00000590696 HIVEP3Q5T1R4 2406 aa20.79■□□□□ 0.92
DDX39A-215ENST00000590696 A0A1W2PPV9 198 aa20.79■□□□□ 0.92
DDX39A-215ENST00000590696 AP3B1O00203 1094 aa20.79■□□□□ 0.92
DDX39A-215ENST00000590696 VAPBO95292 243 aa20.79■□□□□ 0.92
DDX39A-215ENST00000590696 EIF2S1P05198 315 aaKnown RBP20.79■□□□□ 0.92
DDX39A-215ENST00000590696 MGAT1P26572 445 aa20.79■□□□□ 0.92
DDX39A-215ENST00000590696 COL8A1P27658 744 aa20.79■□□□□ 0.92
DDX39A-215ENST00000590696 CDC25BP30305 580 aa20.79■□□□□ 0.92
DDX39A-215ENST00000590696 FASTKQ14296 549 aaKnown RBP20.79■□□□□ 0.92
DDX39A-215ENST00000590696 DRICH1Q6PGQ1 229 aaPredicted RBP20.79■□□□□ 0.92
DDX39A-215ENST00000590696 CES3Q6UWW8 571 aa20.79■□□□□ 0.92
DDX39A-215ENST00000590696 GSTA5Q7RTV2 222 aa20.79■□□□□ 0.92
DDX39A-215ENST00000590696 OR11G2Q8NGC1 345 aa20.79■□□□□ 0.92
DDX39A-215ENST00000590696 MFSD3Q96ES6 412 aa20.79■□□□□ 0.92
DDX39A-215ENST00000590696 THOC3Q96J01 351 aaKnown RBP20.79■□□□□ 0.92
DDX39A-215ENST00000590696 VPS50Q96JG6 964 aa20.79■□□□□ 0.92
DDX39A-215ENST00000590696 KIFC1Q9BW19 673 aa20.79■□□□□ 0.92
DDX39A-215ENST00000590696 SYBUQ9NX95 663 aa20.79■□□□□ 0.92
DDX39A-215ENST00000590696 SPATA7Q9P0W8 599 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms