RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 FITM1A5D6W6 292 aa16.07■□□□□ 0.16
USB1-211ENST00000565662 GOLGA8KD6RF30 607 aa16.07■□□□□ 0.16
USB1-211ENST00000565662 GOLGA8TH3BQL2 631 aa16.07■□□□□ 0.16
USB1-211ENST00000565662 DSCR3O14972 297 aa16.07■□□□□ 0.16
USB1-211ENST00000565662 PRICKLE3O43900 615 aaPredicted RBP16.07■□□□□ 0.16
USB1-211ENST00000565662 IPO13O94829 963 aaKnown RBP16.07■□□□□ 0.16
USB1-211ENST00000565662 ONECUT2O95948 504 aa16.07■□□□□ 0.16
USB1-211ENST00000565662 ALPPP05187 535 aa16.07■□□□□ 0.16
USB1-211ENST00000565662 CCND1P24385 295 aa16.07■□□□□ 0.16
USB1-211ENST00000565662 RPA3P35244 121 aaPredicted RBP16.07■□□□□ 0.16
USB1-211ENST00000565662 CLCN7P51798 805 aa16.07■□□□□ 0.16
USB1-211ENST00000565662 TERF1P54274 439 aa16.07■□□□□ 0.16
USB1-211ENST00000565662 DR1Q01658 176 aa16.07■□□□□ 0.16
USB1-211ENST00000565662 KCNC4Q03721 635 aa16.07■□□□□ 0.16
USB1-211ENST00000565662 FRG1Q14331 258 aaKnown RBP16.07■□□□□ 0.16
USB1-211ENST00000565662 ZIC1Q15915 447 aa16.07■□□□□ 0.16
USB1-211ENST00000565662 NKAIN1Q4KMZ8 207 aa16.07■□□□□ 0.16
USB1-211ENST00000565662 RNF44Q7L0R7 432 aa16.07■□□□□ 0.16
USB1-211ENST00000565662 MCATQ8IVS2 390 aaKnown RBP16.07■□□□□ 0.16
USB1-211ENST00000565662 CNTN4Q8IWV2 1026 aa16.07■□□□□ 0.16
USB1-211ENST00000565662 ZNF655Q8N720 491 aaPredicted RBP16.07■□□□□ 0.16
USB1-211ENST00000565662 CLEC1AQ8NC01 280 aa16.07■□□□□ 0.16
USB1-211ENST00000565662 ZNF285Q96NJ3 590 aa16.07■□□□□ 0.16
USB1-211ENST00000565662 ZFYVE21Q9BQ24 234 aa16.07■□□□□ 0.16
USB1-211ENST00000565662 SLC25A23Q9BV35 468 aa16.07■□□□□ 0.16
USB1-211ENST00000565662 FAM129AQ9BZQ8 928 aa16.07■□□□□ 0.16
USB1-211ENST00000565662 KLHL25Q9H0H3 589 aa16.07■□□□□ 0.16
USB1-211ENST00000565662 DDX47Q9H0S4 455 aaKnown RBP16.07■□□□□ 0.16
USB1-211ENST00000565662 CDC14AQ9UNH5 594 aa16.07■□□□□ 0.16
USB1-211ENST00000565662 SNRNP200O75643 2136 aaKnown RBP16.07■□□□□ 0.16
USB1-211ENST00000565662 C8GP07360 202 aa16.06■□□□□ 0.16
USB1-211ENST00000565662 CAPN1P07384 714 aa16.06■□□□□ 0.16
USB1-211ENST00000565662 EZRP15311 586 aaKnown RBP16.06■□□□□ 0.16
USB1-211ENST00000565662 GRIA3P42263 894 aa16.06■□□□□ 0.16
USB1-211ENST00000565662 BDKRB1P46663 353 aa16.06■□□□□ 0.16
USB1-211ENST00000565662 ARL4CP56559 192 aa16.06■□□□□ 0.16
USB1-211ENST00000565662 IL10RAQ13651 578 aa16.06■□□□□ 0.16
USB1-211ENST00000565662 MUM1Q2TAK8 710 aa16.06■□□□□ 0.16
USB1-211ENST00000565662 DEFB110Q30KQ9 67 aa16.06■□□□□ 0.16
USB1-211ENST00000565662 PTCHD3Q3KNS1 767 aa16.06■□□□□ 0.16
USB1-211ENST00000565662 ATP1A1-AS1Q5TC04 95 aa16.06■□□□□ 0.16
USB1-211ENST00000565662 ASB18Q6ZVZ8 466 aa16.06■□□□□ 0.16
USB1-211ENST00000565662 C2CD4AQ8NCU7 369 aaPredicted RBP16.06■□□□□ 0.16
USB1-211ENST00000565662 PTERQ96BW5 349 aa16.06■□□□□ 0.16
USB1-211ENST00000565662 AARSD1Q9BTE6 412 aaKnown RBP16.06■□□□□ 0.16
USB1-211ENST00000565662 SLC26A1Q9H2B4 701 aa16.06■□□□□ 0.16
USB1-211ENST00000565662 MRPS30Q9NP92 439 aaKnown RBP16.06■□□□□ 0.16
USB1-211ENST00000565662 NSMCE4AQ9NXX6 385 aa16.06■□□□□ 0.16
USB1-211ENST00000565662 TP53TG5Q9Y2B4 290 aa16.06■□□□□ 0.16
USB1-211ENST00000565662 NFS1Q9Y697 457 aa16.06■□□□□ 0.16
USB1-211ENST00000565662 OR2A25A4D2G3 310 aa16.05■□□□□ 0.16
USB1-211ENST00000565662 SLC16A5O15375 505 aa16.05■□□□□ 0.16
USB1-211ENST00000565662 DPM1O60762 260 aa16.05■□□□□ 0.16
USB1-211ENST00000565662 CEACAM4O75871 244 aa16.05■□□□□ 0.16
USB1-211ENST00000565662 FURINP09958 794 aa16.05■□□□□ 0.16
USB1-211ENST00000565662 PNLIPRP1P54315 467 aa16.05■□□□□ 0.16
USB1-211ENST00000565662 RPS18P62269 152 aaKnown RBP16.05■□□□□ 0.16
USB1-211ENST00000565662 HIF1AQ16665 826 aa16.05■□□□□ 0.16
USB1-211ENST00000565662 HSP90AA5PQ58FG0 334 aa16.05■□□□□ 0.16
USB1-211ENST00000565662 ACSBG2Q5FVE4 666 aa16.05■□□□□ 0.16
USB1-211ENST00000565662 GARNL3Q5VVW2 1013 aa16.05■□□□□ 0.16
USB1-211ENST00000565662 MRPL14Q6P1L8 145 aaKnown RBP16.05■□□□□ 0.16
USB1-211ENST00000565662 MICALCLQ6ZW33 695 aa16.05■□□□□ 0.16
USB1-211ENST00000565662 DENND6AQ8IWF6 608 aa16.05■□□□□ 0.16
USB1-211ENST00000565662 MYO1HQ8N1T3 1032 aa16.05■□□□□ 0.16
USB1-211ENST00000565662 OR2A1Q8NGT9 310 aa16.05■□□□□ 0.16
USB1-211ENST00000565662 MCOLN3Q8TDD5 553 aa16.05■□□□□ 0.16
USB1-211ENST00000565662 ASB11Q8WXH4 323 aa16.05■□□□□ 0.16
USB1-211ENST00000565662 TM9SF4Q92544 642 aa16.05■□□□□ 0.16
USB1-211ENST00000565662 CERS2Q96G23 380 aa16.05■□□□□ 0.16
USB1-211ENST00000565662 SNF8Q96H20 258 aa16.05■□□□□ 0.16
USB1-211ENST00000565662 IL17FQ96PD4 163 aa16.05■□□□□ 0.16
USB1-211ENST00000565662 AKIRIN1Q9H9L7 192 aaPredicted RBP16.05■□□□□ 0.16
USB1-211ENST00000565662 FBXO6Q9NRD1 293 aaPredicted RBP16.05■□□□□ 0.16
USB1-211ENST00000565662 CUTCQ9NTM9 273 aa16.05■□□□□ 0.16
USB1-211ENST00000565662 C5AR2Q9P296 337 aa16.05■□□□□ 0.16
USB1-211ENST00000565662 TLK1Q9UKI8 766 aa16.05■□□□□ 0.16
USB1-211ENST00000565662 SPTBP11277 2137 aa16.04■□□□□ 0.16
USB1-211ENST00000565662 ARGFXA6NJG6 315 aa16.04■□□□□ 0.16
USB1-211ENST00000565662 ARHGEF33A8MVX0 844 aa16.04■□□□□ 0.16
USB1-211ENST00000565662 GFYI3L273 518 aa16.04■□□□□ 0.16
USB1-211ENST00000565662 ZNF185O15231 689 aa16.04■□□□□ 0.16
USB1-211ENST00000565662 PTGIRP43119 386 aa16.04■□□□□ 0.16
USB1-211ENST00000565662 GCGRP47871 477 aa16.04■□□□□ 0.16
USB1-211ENST00000565662 PRDX1Q06830 199 aaKnown RBP16.04■□□□□ 0.16
USB1-211ENST00000565662 CTBP1Q13363 440 aa16.04■□□□□ 0.16
USB1-211ENST00000565662 PRAMEF17Q5VTA0 474 aa16.04■□□□□ 0.16
USB1-211ENST00000565662 MLIPQ5VWP3 458 aa16.04■□□□□ 0.16
USB1-211ENST00000565662 MAATS1Q7Z4T9 603 aa16.04■□□□□ 0.16
USB1-211ENST00000565662 TAX1BP1Q86VP1 789 aa16.04■□□□□ 0.16
USB1-211ENST00000565662 GPATCH11Q8N954 259 aa16.04■□□□□ 0.16
USB1-211ENST00000565662 CD200R1Q8TD46 325 aa16.04■□□□□ 0.16
USB1-211ENST00000565662 RERGQ96A58 199 aaPredicted RBP16.04■□□□□ 0.16
USB1-211ENST00000565662 MIPEPQ99797 713 aa16.04■□□□□ 0.16
USB1-211ENST00000565662 SPRTNQ9H040 489 aaPredicted RBP16.04■□□□□ 0.16
USB1-211ENST00000565662 ZNF71Q9NQZ8 489 aaPredicted RBP16.04■□□□□ 0.16
USB1-211ENST00000565662 GPR83Q9NYM4 423 aa16.04■□□□□ 0.16
USB1-211ENST00000565662 PTRH2Q9Y3E5 179 aaKnown RBP16.04■□□□□ 0.16
USB1-211ENST00000565662 PCM1Q15154 2024 aa16.04■□□□□ 0.16
USB1-211ENST00000565662 KLF7O75840 302 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms