RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 ZFAND4Q86XD8 727 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 UBALD2Q8IYN6 164 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 ULK2Q8IYT8 1036 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 DSELQ8IZU8 1212 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 PGAM4Q8N0Y7 254 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 FAM13CQ8NE31 585 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 OR5AR1Q8NGP9 310 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 FBXO27Q8NI29 283 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 UBE2E3Q969T4 207 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 WDR34Q96EX3 536 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 TOE1Q96GM8 510 aaKnown RBP13.36□□□□□ -0.27
TPM1-215ENST00000558868 METTL2AQ96IZ6 378 aaKnown RBP13.36□□□□□ -0.27
TPM1-215ENST00000558868 MYOCQ99972 504 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 EFCAB11Q9BUY7 163 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 EHD1Q9H4M9 534 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 CARS2Q9HA77 564 aaKnown RBP13.36□□□□□ -0.27
TPM1-215ENST00000558868 LRTM1Q9HBL6 345 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 MRPL40Q9NQ50 206 aaKnown RBP13.36□□□□□ -0.27
TPM1-215ENST00000558868 TM7SF3Q9NS93 570 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 C1orf109Q9NX04 203 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 GIMAP2Q9UG22 337 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 PSMD13Q9UNM6 376 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 CYP8B1Q9UNU6 501 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 TDRKHQ9Y2W6 561 aaKnown RBP13.36□□□□□ -0.27
TPM1-215ENST00000558868 TMED5Q9Y3A6 229 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 CCL27Q9Y4X3 112 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 C5orf42Q9H799 3197 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 FAM234BA2RU67 622 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 PRR19A6NJB7 356 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 E7ENX8 843 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 E7EQ34 232 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 NRP2O60462 931 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 SLC22A3O75751 556 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 PDYNP01213 254 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 LMNAP02545 664 aaKnown RBP13.35□□□□□ -0.27
TPM1-215ENST00000558868 ERGP11308 486 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 ACPPP15309 386 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 KCNK10P57789 538 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 TAP2Q03519 686 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 ZP2Q05996 745 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 E2F2Q14209 437 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 KRT33BQ14525 404 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 NUMA1Q14980 2115 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 CYP2A13Q16696 494 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 UAP1L1Q3KQV9 507 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 THEMIS2Q5TEJ8 643 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 FBXW10Q5XX13 1052 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 ATG9BQ674R7 924 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 WASH2PQ6VEQ5 465 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 GCNT7Q6ZNI0 430 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 NET1Q7Z628 596 aaPredicted RBP13.35□□□□□ -0.27
TPM1-215ENST00000558868 RGL4Q8IZJ4 473 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 DEFB107AQ8IZN7 70 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 GJD3Q8N144 294 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 SPDYE1Q8NFV5 336 aaPredicted RBP13.35□□□□□ -0.27
TPM1-215ENST00000558868 SMPDL3AQ92484 453 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 ROPN1LQ96C74 230 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 CMTM7Q96FZ5 175 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 BMFQ96LC9 184 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 C12orf66Q96MD2 445 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 OR4K3Q96R72 315 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 FERD3LQ96RJ6 166 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 ZBTB18Q99592 522 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 PCED1AQ9H1Q7 454 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 BRF2Q9HAW0 419 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 FGF22Q9HCT0 170 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 CD93Q9NPY3 652 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 WASH6PQ9NQA3 447 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 NMRK1Q9NWW6 199 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 WSB2Q9NYS7 404 aaPredicted RBP13.35□□□□□ -0.27
TPM1-215ENST00000558868 KCNK6Q9Y257 313 aa13.35□□□□□ -0.27
TPM1-215ENST00000558868 CACNA1GO43497 2377 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 KRBA1A5PL33 1030 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 KRT87PA6NCN2 255 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 PDZK1P1A8MUH7 402 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 NR5A2O00482 541 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 MRASO14807 208 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 ANGPT2O15123 496 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 SEC22BO75396 215 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 FUCA1P04066 466 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 C1GALT1C1LP0DN25 315 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 PRPS2P11908 318 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 NPPBP16860 134 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 NDUFS1P28331 727 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 DIO3P55073 304 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 RPL38P63173 70 aaKnown RBP13.34□□□□□ -0.27
TPM1-215ENST00000558868 PHEXP78562 749 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 TBL3Q12788 808 aaKnown RBP13.34□□□□□ -0.27
TPM1-215ENST00000558868 PRKG2Q13237 762 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 TSTA3Q13630 321 aaPredicted RBP13.34□□□□□ -0.27
TPM1-215ENST00000558868 SNCBQ16143 134 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 TRMT5Q32P41 509 aaKnown RBP13.34□□□□□ -0.27
TPM1-215ENST00000558868 PRAMEF14Q5SWL7 426 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 IL23RQ5VWK5 629 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 PRAMEF13Q5VWM6 474 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 REP15Q6BDI9 236 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 MED27Q6P2C8 311 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 PRMT9Q6P2P2 845 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 BLOC1S3Q6QNY0 202 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 CYP20A1Q6UW02 462 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms