RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 IFRD1O00458 451 aaPredicted RBP14.38□□□□□ -0.11
DDX55-209ENST00000542286 GSTA4O15217 222 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 LILRB3O75022 631 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 PRKD3O94806 890 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 PABPC1P11940 636 aaKnown RBP14.38□□□□□ -0.11
DDX55-209ENST00000542286 PBLDP30039 288 aaPredicted RBP14.38□□□□□ -0.11
DDX55-209ENST00000542286 SHMT2P34897 504 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 MTHFRP42898 656 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 CYP4F3Q08477 520 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 PLPP4Q5VZY2 271 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 ZNF551Q7Z340 670 aaPredicted RBP14.38□□□□□ -0.11
DDX55-209ENST00000542286 TRIM43Q96BQ3 446 aaPredicted RBP14.38□□□□□ -0.11
DDX55-209ENST00000542286 PPP3R2Q96LZ3 170 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 ZSWIM3Q96MP5 696 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 MTERF1Q99551 399 aaKnown RBP14.38□□□□□ -0.11
DDX55-209ENST00000542286 SMPD3Q9NY59 655 aaPredicted RBP14.38□□□□□ -0.11
DDX55-209ENST00000542286 ZDHHC3Q9NYG2 299 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 MYO9BQ13459 2157 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 KPNA4O00629 521 aaPredicted RBP14.37□□□□□ -0.11
DDX55-209ENST00000542286 TPD52L2O43399 206 aaKnown RBP14.37□□□□□ -0.11
DDX55-209ENST00000542286 SOCS5O75159 536 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 ANXA5P08758 320 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 POLR2IP36954 125 aaKnown RBP14.37□□□□□ -0.11
DDX55-209ENST00000542286 PPP3CCP48454 512 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 CASP9P55211 416 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 GRIK2Q13002 908 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 C6orf183Q5T699 404 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 TMEM179BQ7Z7N9 219 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 RIMKLAQ8IXN7 391 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 SACM1LQ9NTJ5 587 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 DAPK2Q9UIK4 370 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 B3GNT3Q9Y2A9 372 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 PCDHB3Q9Y5E6 796 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 PLK4O00444 970 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 KDM1AO60341 852 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 DIRAS1O95057 198 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 CLDN9O95484 217 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 BCL10O95999 233 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 IL7RP16871 459 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 GGT1P19440 569 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 MATN1P21941 496 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 TSTA3Q13630 321 aaPredicted RBP14.37□□□□□ -0.11
DDX55-209ENST00000542286 USP39Q53GS9 565 aaKnown RBP14.37□□□□□ -0.11
DDX55-209ENST00000542286 LY6G5CQ5SRR4 150 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 TMTC4Q5T4D3 741 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 USP45Q70EL2 814 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 DHRSXQ8N5I4 330 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 NETO1Q8TDF5 533 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 BPIFB1Q8TDL5 484 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 TSPEARQ8WU66 669 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 LMLNQ96KR4 655 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 PARVBQ9HBI1 364 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 ERVK-11Q9UQG0 969 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 INVSQ9Y283 1065 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 TRANK1O15050 2925 aa14.37□□□□□ -0.11
DDX55-209ENST00000542286 LEFTY1O75610 366 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 ANXA6P08133 673 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 TYRP14679 529 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 SPINT3P49223 89 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 SLC7A9P82251 487 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 LRRC26Q2I0M4 334 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 ARSIQ5FYB1 569 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 OR4F3Q6IEY1 312 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 TBC1D21Q8IYX1 336 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 ZNF548Q8NEK5 533 aaPredicted RBP14.36□□□□□ -0.11
DDX55-209ENST00000542286 OR2A12Q8NGT7 310 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 ELMO1Q92556 727 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 CCDC138Q96M89 665 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 SEZ6LQ9BYH1 1024 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 ZBP1Q9H171 429 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 ELOVL6Q9H5J4 265 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 TMEM9Q9P0T7 183 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 LAG3P18627 525 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 CD22P20273 847 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 PIGAP37287 484 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 MLLT10P55197 1068 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 CARD16Q5EG05 197 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 PACRGLQ8N7B6 248 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 FAM162AQ96A26 154 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 ZBTB18Q99592 522 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 BARD1Q99728 777 aaKnown RBP14.36□□□□□ -0.11
DDX55-209ENST00000542286 NRTNQ99748 197 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 ASAH2Q9NR71 780 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 C1orf109Q9NX04 203 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 KCTD5Q9NXV2 234 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 PCDHGA11Q9Y5H2 935 aa14.36□□□□□ -0.11
DDX55-209ENST00000542286 DENND4CQ5VZ89 1909 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 FADS2P1A8MWK0 482 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 LATS1O95835 1130 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 CDH1P12830 882 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 S100A1P23297 94 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 AOAHP28039 575 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 CTSCP53634 463 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 ILF2Q12905 390 aaKnown RBP14.35□□□□□ -0.11
DDX55-209ENST00000542286 OXA1LQ15070 435 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 GPR33Q49SQ1 333 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 CACHD1Q5VU97 1274 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 ABRAXAS1Q6UWZ7 409 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 TMCO5AQ8N6Q1 288 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 OR7A2PQ8NGA2 310 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms