RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 CCDC190Q86UF4 302 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 PIANPQ8IYJ0 282 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 FAM9CQ8IZT9 166 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 MGME1Q9BQP7 344 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 REXO4Q9GZR2 422 aaKnown RBP17.15■□□□□ 0.34
RAB40C-205ENST00000539661 PDFQ9HBH1 243 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 TRAPPC4Q9Y296 219 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 SAMHD1Q9Y3Z3 626 aaKnown RBP17.15■□□□□ 0.34
RAB40C-205ENST00000539661 PAX3P23760 479 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 EPHA2P29317 976 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 S100A3P33764 101 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 SOX6P35712 828 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 DDOSTP39656 456 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 CLCN7P51798 805 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 OLR1P78380 273 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 C18orf21Q32NC0 220 aaPredicted RBP17.14■□□□□ 0.33
RAB40C-205ENST00000539661 MDGA1Q8NFP4 955 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 OR10Q1Q8NGQ4 319 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 REEP1Q9H902 201 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 ZFP14Q9HCL3 533 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 QPCTLQ9NXS2 382 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 DKK3Q9UBP4 350 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 TRPS1Q9UHF7 1281 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 SCML2Q9UQR0 700 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 DHRS7Q9Y394 339 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 KLK4Q9Y5K2 254 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 ARL5CA6NH57 179 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 A6NL46 340 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 NOTOA8MTQ0 251 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 M0QZQ0 153 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 CAPN5O15484 640 aaPredicted RBP17.14■□□□□ 0.33
RAB40C-205ENST00000539661 MAGP20916 626 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 PTPN6P29350 595 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 MC4RP32245 332 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 ACVRL1P37023 503 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 ITGA1P56199 1179 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 CLDN8P56748 225 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 TEKQ02763 1124 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 CAMK2GQ13555 558 aaPredicted RBP17.14■□□□□ 0.33
RAB40C-205ENST00000539661 STARD3Q14849 445 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 FAM171A1Q5VUB5 890 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 TMC5Q6UXY8 1006 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 STK40Q8N2I9 435 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 RMDN1Q96DB5 314 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 TMCO6Q96DC7 493 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 PAAF1Q9BRP4 392 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 MIR1-1HGQ9H1L0 117 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 AGO1Q9UL18 857 aaKnown RBP17.14■□□□□ 0.33
RAB40C-205ENST00000539661 PCDHGA6Q9Y5G7 932 aa17.14■□□□□ 0.33
RAB40C-205ENST00000539661 CENPXA8MT69 81 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 GPR182O15218 404 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 PIK3CBP42338 1070 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 PXNP49023 591 aaPredicted RBP17.13■□□□□ 0.33
RAB40C-205ENST00000539661 ZFP69Q49AA0 526 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 INO80DQ53TQ3 878 aaPredicted RBP17.13■□□□□ 0.33
RAB40C-205ENST00000539661 OVOS1Q6IE37 1185 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 METTL2BQ6P1Q9 378 aaKnown RBP17.13■□□□□ 0.33
RAB40C-205ENST00000539661 MSANTD1Q6ZTZ1 278 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 NLGN4XQ8N0W4 816 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 FLCNQ8NFG4 579 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 ZNF675Q8TD23 568 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 ZNF490Q9ULM2 529 aaPredicted RBP17.13■□□□□ 0.33
RAB40C-205ENST00000539661 CLCA1A8K7I4 914 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 ALX3O95076 343 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 MFN2O95140 757 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 C9P02748 559 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 TRAPPC2P0DI81 140 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 TRAPPC2BP0DI82 140 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 BCKDHAP12694 445 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 OR1E1P30953 314 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 SLC15A1P46059 708 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 RPS14P62263 151 aaKnown RBP17.13■□□□□ 0.33
RAB40C-205ENST00000539661 HMGCS1Q01581 520 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 ERICH5Q6P6B1 374 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 RGL4Q8IZJ4 473 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 DNAJC22Q8N4W6 341 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 UBE2FQ969M7 185 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 COL21A1Q96P44 957 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 EPYCQ99645 322 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 PTPN18Q99952 460 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 AASDHPPTQ9NRN7 309 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 DDX28Q9NUL7 540 aaKnown RBP17.13■□□□□ 0.33
RAB40C-205ENST00000539661 ANGPTL3Q9Y5C1 460 aa17.13■□□□□ 0.33
RAB40C-205ENST00000539661 MRPS15P82914 257 aaKnown RBP17.12■□□□□ 0.33
RAB40C-205ENST00000539661 RAP1GAP2Q684P5 730 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 SPATC1Q76KD6 591 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 BRI3BPQ8WY22 251 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 USP7Q93009 1102 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 CRELD1Q96HD1 420 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 NTMT1Q9BV86 223 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 RNF38Q9H0F5 515 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 SARS2Q9NP81 518 aaKnown RBP17.12■□□□□ 0.33
RAB40C-205ENST00000539661 THUMPD1Q9NXG2 353 aaKnown RBP17.12■□□□□ 0.33
RAB40C-205ENST00000539661 SPASTQ9UBP0 616 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 CFL2Q9Y281 166 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 CAB39Q9Y376 341 aaPredicted RBP17.12■□□□□ 0.33
RAB40C-205ENST00000539661 hCG_2039718K7EN88 272 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 PLK4O00444 970 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 TAPBPO15533 448 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 TPD52L2O43399 206 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms