RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 ADARP55265 1226 aaKnown RBP10.18□□□□□ -0.78
NELFE-213ENST00000494956 VSX2P58304 361 aaPredicted RBP10.18□□□□□ -0.78
NELFE-213ENST00000494956 GNG11P61952 73 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 TIAL1Q01085 375 aaKnown RBP eCLIP10.18□□□□□ -0.78
NELFE-213ENST00000494956 PTK6Q13882 451 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 BBS9Q3SYG4 887 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 RBM20Q5T481 1227 aaKnown RBP10.18□□□□□ -0.78
NELFE-213ENST00000494956 TCTN3Q6NUS6 607 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 TLDC1Q6P9B6 456 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 TTC23LQ6PF05 361 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 SHISA6Q6ZSJ9 500 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 TTLL10Q6ZVT0 673 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 PIWIL4Q7Z3Z4 852 aaKnown RBP10.18□□□□□ -0.78
NELFE-213ENST00000494956 KCNMB4Q86W47 210 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 CREG2Q8IUH2 290 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 APLFQ8IW19 511 aaPredicted RBP10.18□□□□□ -0.78
NELFE-213ENST00000494956 CPNE9Q8IYJ1 553 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 C17orf53Q8N3J3 647 aaPredicted RBP10.18□□□□□ -0.78
NELFE-213ENST00000494956 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.18□□□□□ -0.78
NELFE-213ENST00000494956 OR9A1PQ8NGU1 263 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 CD200R1Q8TD46 325 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 GRK7Q8WTQ7 553 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 FOPNLQ96NB1 174 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 MESP1Q9BRJ9 268 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 WDR83Q9BRX9 315 aaKnown RBP10.18□□□□□ -0.78
NELFE-213ENST00000494956 CHRNA10Q9GZZ6 450 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 PLAC1Q9HBJ0 212 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 ACSS2Q9NR19 701 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 TXLNGQ9NUQ3 528 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 INTS10Q9NVR2 710 aaKnown RBP10.18□□□□□ -0.78
NELFE-213ENST00000494956 LUZP4Q9P127 313 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 IFT80Q9P2H3 777 aaPredicted RBP10.18□□□□□ -0.78
NELFE-213ENST00000494956 NDOR1Q9UHB4 597 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 PTRH2Q9Y3E5 179 aaKnown RBP10.18□□□□□ -0.78
NELFE-213ENST00000494956 MAU2Q9Y6X3 613 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 FAM169AQ9Y6X4 670 aa10.18□□□□□ -0.78
NELFE-213ENST00000494956 NUP210LQ5VU65 1888 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 IGKV1-8A0A0C4DH67 115 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 MAGEB16A2A368 324 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 H3BMM5 538 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 CES2O00748 559 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 FFAR3O14843 346 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 GPR42O15529 346 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 SYF2O95926 243 aaKnown RBP10.17□□□□□ -0.78
NELFE-213ENST00000494956 STATHP02808 62 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 EIF2S1P05198 315 aaKnown RBP10.17□□□□□ -0.78
NELFE-213ENST00000494956 HBQ1P09105 142 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 PGAM1P18669 254 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 GABRB3P28472 473 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 CCNFP41002 786 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 OR1D4P47884 311 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 MLLT10P55197 1068 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 SNRPNP63162 240 aaKnown RBP10.17□□□□□ -0.78
NELFE-213ENST00000494956 DCDP81605 110 aaKnown RBP10.17□□□□□ -0.78
NELFE-213ENST00000494956 KCNC4Q03721 635 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 DSG2Q14126 1118 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 CRYMQ14894 314 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 CYP2A13Q16696 494 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 NADK2Q4G0N4 442 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 NKAIN1Q4KMZ8 207 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 WASHC2DQ5SRD0 308 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 FBXO42Q6P3S6 717 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 CYHR1Q6ZMK1 362 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 COX15Q7KZN9 410 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 FDCSPQ8NFU4 85 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 HMGCLL1Q8TB92 370 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 THAP4Q8WY91 577 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 DLG3Q92796 817 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 SLC22A18Q96BI1 424 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 CFAP36Q96G28 342 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 PDLIM2Q96JY6 352 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 DPH7Q9BTV6 452 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 NDC1Q9BTX1 674 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 SLC25A23Q9BV35 468 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 NUDT9Q9BW91 350 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 RAB11FIP5Q9BXF6 653 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 TRIM31Q9BZY9 425 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 CLMPQ9H6B4 373 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 CUTCQ9NTM9 273 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 ZC3H7BQ9UGR2 993 aaKnown RBP10.17□□□□□ -0.78
NELFE-213ENST00000494956 TAC3Q9UHF0 121 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 GPN3Q9UHW5 284 aaPredicted RBP10.17□□□□□ -0.78
NELFE-213ENST00000494956 PLAAQ9Y263 795 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 AP1M2Q9Y6Q5 423 aa10.17□□□□□ -0.78
NELFE-213ENST00000494956 SPTA1P02549 2419 aa10.16□□□□□ -0.78
NELFE-213ENST00000494956 MYO1CO00159 1063 aa10.16□□□□□ -0.78
NELFE-213ENST00000494956 PFDN6O15212 129 aa10.16□□□□□ -0.78
NELFE-213ENST00000494956 TTI1O43156 1089 aa10.16□□□□□ -0.78
NELFE-213ENST00000494956 SLC16A8O95907 504 aa10.16□□□□□ -0.78
NELFE-213ENST00000494956 UMODP07911 640 aa10.16□□□□□ -0.78
NELFE-213ENST00000494956 ERGP11308 486 aa10.16□□□□□ -0.78
NELFE-213ENST00000494956 TCP1P17987 556 aaKnown RBP10.16□□□□□ -0.78
NELFE-213ENST00000494956 ATP5DP30049 168 aa10.16□□□□□ -0.78
NELFE-213ENST00000494956 CASRP41180 1078 aa10.16□□□□□ -0.78
NELFE-213ENST00000494956 FOLR3P41439 243 aa10.16□□□□□ -0.78
NELFE-213ENST00000494956 ELK3P41970 407 aa10.16□□□□□ -0.78
NELFE-213ENST00000494956 CARSP49589 748 aaKnown RBP10.16□□□□□ -0.78
NELFE-213ENST00000494956 CSRP3P50461 194 aa10.16□□□□□ -0.78
NELFE-213ENST00000494956 CDKN2DP55273 166 aa10.16□□□□□ -0.78
NELFE-213ENST00000494956 KLRB1Q12918 225 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms