RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 HMGCLL1Q8TB92 370 aa20.15■□□□□ 0.82
VSX1-206ENST00000444511 LPGAT1Q92604 370 aa20.15■□□□□ 0.82
VSX1-206ENST00000444511 FAM136AQ96C01 138 aa20.15■□□□□ 0.82
VSX1-206ENST00000444511 ZNF285Q96NJ3 590 aa20.15■□□□□ 0.82
VSX1-206ENST00000444511 TCF12Q99081 682 aa20.15■□□□□ 0.82
VSX1-206ENST00000444511 ILKAPQ9H0C8 392 aaPredicted RBP20.15■□□□□ 0.82
VSX1-206ENST00000444511 IL1RAPL1Q9NZN1 696 aa20.15■□□□□ 0.82
VSX1-206ENST00000444511 SPATA7Q9P0W8 599 aa20.15■□□□□ 0.82
VSX1-206ENST00000444511 NXT1Q9UKK6 140 aaKnown RBP20.15■□□□□ 0.82
VSX1-206ENST00000444511 FER1L5A0AVI2 2057 aa20.15■□□□□ 0.82
VSX1-206ENST00000444511 NAV2Q8IVL1 2488 aa20.15■□□□□ 0.82
VSX1-206ENST00000444511 TCRBV7S3A2A0A539 114 aa20.14■□□□□ 0.81
VSX1-206ENST00000444511 SRPX2O60687 465 aaPredicted RBP20.14■□□□□ 0.81
VSX1-206ENST00000444511 CTSVO60911 334 aa20.14■□□□□ 0.81
VSX1-206ENST00000444511 ONECUT2O95948 504 aa20.14■□□□□ 0.81
VSX1-206ENST00000444511 ESR1P03372 595 aa20.14■□□□□ 0.81
VSX1-206ENST00000444511 PAMP19021 973 aa20.14■□□□□ 0.81
VSX1-206ENST00000444511 CHRM3P20309 590 aa20.14■□□□□ 0.81
VSX1-206ENST00000444511 ITGA3P26006 1051 aa20.14■□□□□ 0.81
VSX1-206ENST00000444511 VPS41P49754 854 aa20.14■□□□□ 0.81
VSX1-206ENST00000444511 SOX8P57073 446 aa20.14■□□□□ 0.81
VSX1-206ENST00000444511 AIMP2Q13155 320 aaKnown RBP20.14■□□□□ 0.81
VSX1-206ENST00000444511 KCTD19Q17RG1 926 aaPredicted RBP20.14■□□□□ 0.81
VSX1-206ENST00000444511 WASHC2DQ5SRD0 308 aa20.14■□□□□ 0.81
VSX1-206ENST00000444511 KIAA0930Q6ICG6 404 aaPredicted RBP20.14■□□□□ 0.81
VSX1-206ENST00000444511 IGFL3Q6UXB1 125 aa20.14■□□□□ 0.81
VSX1-206ENST00000444511 ZADH2Q8N4Q0 377 aa20.14■□□□□ 0.81
VSX1-206ENST00000444511 METTL27Q8N6F8 245 aaPredicted RBP20.14■□□□□ 0.81
VSX1-206ENST00000444511 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.14■□□□□ 0.81
VSX1-206ENST00000444511 SPSB2Q99619 263 aa20.14■□□□□ 0.81
VSX1-206ENST00000444511 SLC26A1Q9H2B4 701 aa20.14■□□□□ 0.81
VSX1-206ENST00000444511 ENAMQ9NRM1 1142 aa20.14■□□□□ 0.81
VSX1-206ENST00000444511 FBXL4Q9UKA2 621 aa20.14■□□□□ 0.81
VSX1-206ENST00000444511 CRYL1Q9Y2S2 319 aa20.14■□□□□ 0.81
VSX1-206ENST00000444511 FITM1A5D6W6 292 aa20.13■□□□□ 0.81
VSX1-206ENST00000444511 ATP5DP30049 168 aa20.13■□□□□ 0.81
VSX1-206ENST00000444511 OR1D4P47884 311 aa20.13■□□□□ 0.81
VSX1-206ENST00000444511 ADARP55265 1226 aaKnown RBP20.13■□□□□ 0.81
VSX1-206ENST00000444511 GPS1Q13098 491 aa20.13■□□□□ 0.81
VSX1-206ENST00000444511 MRPL49Q13405 166 aaKnown RBP20.13■□□□□ 0.81
VSX1-206ENST00000444511 CASC4Q6P4E1 433 aa20.13■□□□□ 0.81
VSX1-206ENST00000444511 SHISA6Q6ZSJ9 500 aa20.13■□□□□ 0.81
VSX1-206ENST00000444511 COX15Q7KZN9 410 aa20.13■□□□□ 0.81
VSX1-206ENST00000444511 PRELID2Q8N945 189 aa20.13■□□□□ 0.81
VSX1-206ENST00000444511 OR2A1Q8NGT9 310 aa20.13■□□□□ 0.81
VSX1-206ENST00000444511 SNRNP40Q96DI7 357 aaKnown RBP20.13■□□□□ 0.81
VSX1-206ENST00000444511 C19orf60Q96EN9 201 aa20.13■□□□□ 0.81
VSX1-206ENST00000444511 SOX17Q9H6I2 414 aaPredicted RBP20.13■□□□□ 0.81
VSX1-206ENST00000444511 SLC6A20Q9NP91 592 aa20.13■□□□□ 0.81
VSX1-206ENST00000444511 CTSFQ9UBX1 484 aa20.13■□□□□ 0.81
VSX1-206ENST00000444511 KLK4Q9Y5K2 254 aa20.13■□□□□ 0.81
VSX1-206ENST00000444511 SNRNP200O75643 2136 aaKnown RBP20.12■□□□□ 0.81
VSX1-206ENST00000444511 A0A0J9YVX5 310 aa20.12■□□□□ 0.81
VSX1-206ENST00000444511 A0A1W2PPV9 198 aa20.12■□□□□ 0.81
VSX1-206ENST00000444511 HYKKA2RU49 373 aa20.12■□□□□ 0.81
VSX1-206ENST00000444511 E5RI56 91 aa20.12■□□□□ 0.81
VSX1-206ENST00000444511 AVILO75366 819 aa20.12■□□□□ 0.81
VSX1-206ENST00000444511 MATN4O95460 622 aa20.12■□□□□ 0.81
VSX1-206ENST00000444511 EIF2S1P05198 315 aaKnown RBP20.12■□□□□ 0.81
VSX1-206ENST00000444511 OGNP20774 298 aaKnown RBP20.12■□□□□ 0.81
VSX1-206ENST00000444511 CMPK1P30085 196 aa20.12■□□□□ 0.81
VSX1-206ENST00000444511 GBX1Q14549 363 aa20.12■□□□□ 0.81
VSX1-206ENST00000444511 KCNJ11Q14654 390 aa20.12■□□□□ 0.81
VSX1-206ENST00000444511 NAA25Q14CX7 972 aa20.12■□□□□ 0.81
VSX1-206ENST00000444511 EIF2S3LQ2VIR3 472 aaKnown RBP20.12■□□□□ 0.81
VSX1-206ENST00000444511 IRAK1BP1Q5VVH5 260 aa20.12■□□□□ 0.81
VSX1-206ENST00000444511 PRAMEF13Q5VWM6 474 aa20.12■□□□□ 0.81
VSX1-206ENST00000444511 FRMPD2BQ6IN97 320 aa20.12■□□□□ 0.81
VSX1-206ENST00000444511 CISD2Q8N5K1 135 aaKnown RBP20.12■□□□□ 0.81
VSX1-206ENST00000444511 OR9A1PQ8NGU1 263 aa20.12■□□□□ 0.81
VSX1-206ENST00000444511 SSC4DQ8WTU2 575 aa20.12■□□□□ 0.81
VSX1-206ENST00000444511 VPS50Q96JG6 964 aa20.12■□□□□ 0.81
VSX1-206ENST00000444511 ACAT2Q9BWD1 397 aa20.12■□□□□ 0.81
VSX1-206ENST00000444511 SAMD15Q9P1V8 674 aa20.12■□□□□ 0.81
VSX1-206ENST00000444511 ZC3H7BQ9UGR2 993 aaKnown RBP20.12■□□□□ 0.81
VSX1-206ENST00000444511 VPS9D1Q9Y2B5 631 aa20.12■□□□□ 0.81
VSX1-206ENST00000444511 HS3ST3B1Q9Y662 390 aa20.12■□□□□ 0.81
VSX1-206ENST00000444511 MAU2Q9Y6X3 613 aa20.12■□□□□ 0.81
VSX1-206ENST00000444511 USP9XQ93008 2570 aaPredicted RBP20.12■□□□□ 0.81
VSX1-206ENST00000444511 SOCS6O14544 535 aa20.11■□□□□ 0.81
VSX1-206ENST00000444511 SEMA7AO75326 666 aa20.11■□□□□ 0.81
VSX1-206ENST00000444511 ALOX12BO75342 701 aa20.11■□□□□ 0.81
VSX1-206ENST00000444511 ERVK-10P10266 1014 aa20.11■□□□□ 0.81
VSX1-206ENST00000444511 PKMP14618 531 aaKnown RBP20.11■□□□□ 0.81
VSX1-206ENST00000444511 FASTKQ14296 549 aaKnown RBP20.11■□□□□ 0.81
VSX1-206ENST00000444511 RBBP7Q16576 425 aa20.11■□□□□ 0.81
VSX1-206ENST00000444511 ANKRD20A4Q4UJ75 823 aa20.11■□□□□ 0.81
VSX1-206ENST00000444511 ACSBG2Q5FVE4 666 aa20.11■□□□□ 0.81
VSX1-206ENST00000444511 ARMC3Q5W041 872 aa20.11■□□□□ 0.81
VSX1-206ENST00000444511 NEPROQ6NW34 567 aa20.11■□□□□ 0.81
VSX1-206ENST00000444511 RNF44Q7L0R7 432 aa20.11■□□□□ 0.81
VSX1-206ENST00000444511 PRR7Q8TB68 274 aa20.11■□□□□ 0.81
VSX1-206ENST00000444511 ZFYVE21Q9BQ24 234 aa20.11■□□□□ 0.81
VSX1-206ENST00000444511 DPH7Q9BTV6 452 aa20.11■□□□□ 0.81
VSX1-206ENST00000444511 ZBTB20Q9HC78 741 aaPredicted RBP20.11■□□□□ 0.81
VSX1-206ENST00000444511 ZNF304Q9HCX3 659 aa20.11■□□□□ 0.81
VSX1-206ENST00000444511 FAM114A2Q9NRY5 505 aa20.11■□□□□ 0.81
VSX1-206ENST00000444511 SEMA3GQ9NS98 782 aa20.11■□□□□ 0.81
VSX1-206ENST00000444511 ASF1BQ9NVP2 202 aa20.11■□□□□ 0.81
VSX1-206ENST00000444511 USP9YO00507 2555 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms