RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 MAP7D3Q8IWC1 876 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 DCLK2Q8N568 766 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 MRPL43Q8N983 215 aaKnown RBP4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 COLGALT1Q8NBJ5 622 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 OR52I2Q8NH67 350 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 TAS1R2Q8TE23 839 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 SLC38A5Q8WUX1 472 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 HTRA1Q92743 480 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 TAAR8Q969N4 342 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 SAAL1Q96ER3 474 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 ACOX2Q99424 681 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 C1QTNF5Q9BXJ0 243 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 GFRA4Q9GZZ7 299 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 SLC25A18Q9H1K4 315 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 SMARCAD1Q9H4L7 1026 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 ERAP1Q9NZ08 941 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 POLG2Q9UHN1 485 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 TUBE1Q9UJT0 475 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 FBXL2Q9UKC9 423 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 ACSL5Q9ULC5 683 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 TRPV2Q9Y5S1 764 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 CYP46A1Q9Y6A2 500 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 RALGAPA1Q6GYQ0 2036 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 IGSF9BQ9UPX0 1349 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 FAM237AA0A1B0GTK4 181 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 MBLAC1A4D2B0 266 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 ANTXRLA6NF34 631 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 HIDE1A8MVS5 230 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 FIBPO43427 364 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 SYNGR3O43761 229 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 CXCL14O95715 111 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 POLR2MP0CAP2 368 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 ALDH4A1P30038 563 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 CA8P35219 290 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 MAGEA9P43362 315 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 TNNT3P45378 269 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 MAPK9P45984 424 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 PPM1FP49593 454 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 HMGN5P82970 282 aaKnown RBP4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 RPL24P83731 157 aaKnown RBP4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 ALX1Q15699 326 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 QRICH1Q2TAL8 776 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 ASPRV1Q53RT3 343 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 RARS2Q5T160 578 aaKnown RBP4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 ARHGAP17Q68EM7 881 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 MFSD6Q6ZSS7 791 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 DPPA4Q7L190 304 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 IQCA1Q86XH1 822 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 ZNF354CQ86Y25 554 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 NRROSQ86YC3 692 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 SRBD1Q8N5C6 995 aaKnown RBP4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 SUMF1Q8NBK3 374 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 THAP6Q8TBB0 222 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 SEPT1Q8WYJ6 367 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 RSPH1Q8WYR4 309 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 ESR2Q92731 530 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 GTF3C6Q969F1 213 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 IGSF8Q969P0 613 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 SCRN2Q96FV2 425 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 CDHR1Q96JP9 859 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 PPP1R13BQ96KQ4 1090 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 HARBI1Q96MB7 349 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 SEC62Q99442 399 aaKnown RBP4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 LITAFQ99732 161 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 RNF41Q9H4P4 317 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 VAT1LQ9HCJ6 419 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 RGS18Q9NS28 235 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 TMEM161AQ9NX61 479 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 SPG21Q9NZD8 308 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 STK39Q9UEW8 545 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 INTS6Q9UL03 887 aaKnown RBP4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 DDX19BQ9UMR2 479 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 CAMK2AQ9UQM7 478 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 MIA3Q5JRA6 1907 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 DOCK5Q9H7D0 1870 aa4.54□□□□□ -1.68
HMGB3P5-201ENST00000428894 ANKRD11Q6UB99 2663 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 KDM3AQ9Y4C1 1321 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 ZCWPW2A0A1B0GU75 182 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 PES1O00541 588 aaKnown RBP4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 HS3ST1O14792 307 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 ZBTB5O15062 677 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 NCAM2O15394 837 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 TNFSF14O43557 240 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 RPS6KA5O75582 802 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 F9P00740 461 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 TPM3P06753 285 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 GOLGA8HP0CJ92 632 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 RNF224P0DH78 156 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 IL7RP16871 459 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 ZNF182P17025 639 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 TCF7P36402 384 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 DCTP40126 519 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 EIF3BP55884 814 aaKnown RBP4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 CLDN20P56880 219 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 PLIN5Q00G26 463 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 PMP22Q01453 160 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 DCTN2Q13561 401 aaKnown RBP4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 FCN2Q15485 313 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 LETM2Q2VYF4 491 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms