RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 YAE1D1Q9NRH1 226 aa4.79□□□□□ -1.64
GABPB1-204ENST00000396464 FAM120CQ9NX05 1096 aaKnown RBP4.79□□□□□ -1.64
GABPB1-204ENST00000396464 NIP7Q9Y221 180 aaKnown RBP eCLIP4.79□□□□□ -1.64
GABPB1-204ENST00000396464 C15orf41Q9Y2V0 281 aa4.79□□□□□ -1.64
GABPB1-204ENST00000396464 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.79□□□□□ -1.64
GABPB1-204ENST00000396464 A0A0A0MQY5 61 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 A0A0U1RRA0 63 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 A1L4Q6 167 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 C4orf47A7E2U8 309 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 MEI4A8MW99 385 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 ADAM12O43184 909 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 ATP6V1G1O75348 118 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 RAD51DO75771 328 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 CSTAP01040 98 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 TPM3P06753 285 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 MYZAPP0CAP1 466 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 ERVK-10P10266 1014 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 ODC1P11926 461 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 GCFC2P16383 781 aaKnown RBP4.78□□□□□ -1.64
GABPB1-204ENST00000396464 ZNF18P17022 549 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 NMBRP28336 390 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 RYKP34925 604 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 PTGER1P34995 402 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 IER3P46695 156 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 STARP49675 285 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 ENTPD1P49961 510 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 SLC8A3P57103 927 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 SORDQ00796 357 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 RHAGQ02094 409 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 SLC18A2Q05940 514 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 NAE1Q13564 534 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 DYRK1AQ13627 763 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 CYP1B1Q16678 543 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 C18orf63Q68DL7 685 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 TTC19Q6DKK2 380 aaPredicted RBP4.78□□□□□ -1.64
GABPB1-204ENST00000396464 KCNV1Q6PIU1 500 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 CORO6Q6QEF8 472 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 PCSK4Q6UW60 755 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 DPPA4Q7L190 304 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 CLNKQ7Z7G1 428 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 MRGPREQ86SM8 312 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 TMEM126BQ8IUX1 230 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 C1orf87Q8N0U7 546 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 TCAIMQ8N3R3 496 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 CERS5Q8N5B7 392 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 BOLLQ8N9W6 283 aaKnown RBP4.78□□□□□ -1.64
GABPB1-204ENST00000396464 BBS1Q8NFJ9 593 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 BPIFCQ8NFQ6 507 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 PROKR1Q8TCW9 393 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 SNX19Q92543 992 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 DPF1Q92782 380 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 ISG20Q96AZ6 181 aaKnown RBP4.78□□□□□ -1.64
GABPB1-204ENST00000396464 R3HDM4Q96D70 268 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 ZC3HAV1LQ96H79 300 aaKnown RBP4.78□□□□□ -1.64
GABPB1-204ENST00000396464 ZNF512Q96ME7 567 aaPredicted RBP4.78□□□□□ -1.64
GABPB1-204ENST00000396464 PRR25Q96S07 402 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 SEPHS2Q99611 448 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 ALG12Q9BV10 488 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 IFT27Q9BW83 186 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 PINK1Q9BXM7 581 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 FN3KRPQ9HA64 309 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 KCNK13Q9HB14 408 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 TRPC7Q9HCX4 862 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 TFCP2L1Q9NZI6 479 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 KLHL9Q9P2J3 617 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 ATXN10Q9UBB4 475 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 MGAT4CQ9UBM8 478 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 ZNHIT2Q9UHR6 403 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 FBXO4Q9UKT5 387 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 ANGPTL2Q9UKU9 493 aa4.78□□□□□ -1.64
GABPB1-204ENST00000396464 PARD3Q8TEW0 1356 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 SF3B1O75533 1304 aaKnown RBP eCLIP4.77□□□□□ -1.65
GABPB1-204ENST00000396464 PRAMEF33A0A0G2JMD5 474 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 A0A1W2PPQ1 181 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 A0A1W2PS29 197 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 AP4M1O00189 453 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 SLC28A1O00337 649 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 CES2O00748 559 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 RRP8O43159 456 aaKnown RBP4.77□□□□□ -1.65
GABPB1-204ENST00000396464 NDUFS4O43181 175 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 ZNF264O43296 627 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 PRAMEF10O60809 474 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 ZNF217O75362 1048 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 ZFPL1O95159 310 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 OR6A2O95222 327 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 C1RP00736 705 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 FHP07954 510 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 PABPC4LP0CB38 370 aaKnown RBP4.77□□□□□ -1.65
GABPB1-204ENST00000396464 ZCCHC18P0CG32 403 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 OR8G3PP0DMU2 310 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 HPGDP15428 266 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 TNNI3P19429 210 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 PAICSP22234 425 aaKnown RBP4.77□□□□□ -1.65
GABPB1-204ENST00000396464 CDC25AP30304 524 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 HLA-FP30511 346 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 ASCL1P50553 236 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 CLCN4P51793 760 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 DHX34Q14147 1143 aaKnown RBP4.77□□□□□ -1.65
GABPB1-204ENST00000396464 PDIA5Q14554 519 aa4.77□□□□□ -1.65
GABPB1-204ENST00000396464 RFTN1Q14699 578 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms