RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 PRSS38A1L453 326 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 GOLGA8OA6NCC3 632 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 GOLGA8NF8WBI6 632 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 IFRD1O00458 451 aaPredicted RBP11.72□□□□□ -0.53
USF1-203ENST00000368021 GFRA3O60609 400 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 CRCPO75575 148 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 RPN2P04844 631 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 EBLN1P0CF75 366 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 NEK2P51955 445 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 CLDN2P57739 230 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 ERVPABLB-1P60509 514 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 RPL6Q02878 288 aaKnown RBP11.72□□□□□ -0.53
USF1-203ENST00000368021 CCDC6Q16204 474 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 PTCHD3Q3KNS1 767 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 PLK5Q496M5 336 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 OR52E8Q6IFG1 317 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 LETMD1Q6P1Q0 360 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 ABI3BPQ7Z7G0 1075 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 ATP6V1E2Q96A05 226 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 WDR92Q96MX6 357 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 CCDC106Q9BWC9 280 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 PCED1AQ9H1Q7 454 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 DUSP15Q9H1R2 295 aaPredicted RBP11.72□□□□□ -0.53
USF1-203ENST00000368021 EPB41L1Q9H4G0 881 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 DCLRE1BQ9H816 532 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 FGF22Q9HCT0 170 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 TIMMDC1Q9NPL8 285 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 TM7SF3Q9NS93 570 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 STOX2Q9P2F5 926 aaPredicted RBP11.72□□□□□ -0.53
USF1-203ENST00000368021 ZNF292O60281 2723 aa11.72□□□□□ -0.53
USF1-203ENST00000368021 FAM186AA6NE01 2351 aa11.71□□□□□ -0.53
USF1-203ENST00000368021 OTOGLQ3ZCN5 2332 aa11.71□□□□□ -0.53
USF1-203ENST00000368021 SPAG17Q6Q759 2223 aa11.71□□□□□ -0.53
USF1-203ENST00000368021 IGHV1OR15-9A0A0B4J2B8 117 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 PROB1E7EW31 1015 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 E9PBE3 544 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 H0Y8X5 98 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 SLC22A2O15244 555 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 KLHL41O60662 606 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 VPS4BO75351 444 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 OR4F21O95013 312 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 SLC16A8O95907 504 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 ACP5P13686 325 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 IMPA1P29218 277 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 ADSLP30566 484 aaPredicted RBP11.71□□□□□ -0.54
USF1-203ENST00000368021 VHLP40337 213 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 BDKRB1P46663 353 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 RABIFP47224 123 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 DHPSP49366 369 aaPredicted RBP11.71□□□□□ -0.54
USF1-203ENST00000368021 NCALDP61601 193 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 CBX3Q13185 183 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 LSAMPQ13449 338 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 INAQ16352 499 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 GGTA1PQ4G0N0 100 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 AGTRAPQ6RW13 159 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 RNF165Q6ZSG1 346 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 CHST15Q7LFX5 561 aaPredicted RBP11.71□□□□□ -0.54
USF1-203ENST00000368021 MILR1Q7Z6M3 343 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 DCUN1D3Q8IWE4 304 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 OR4F6Q8NGB9 312 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 OR9A1PQ8NGU1 263 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 OR56A3Q8NH54 315 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 FAM174AQ8TBP5 190 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 TFGQ92734 400 aaPredicted RBP11.71□□□□□ -0.54
USF1-203ENST00000368021 BIRC7Q96CA5 298 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 PRR11Q96HE9 360 aaPredicted RBP11.71□□□□□ -0.54
USF1-203ENST00000368021 PPP1R36Q96LQ0 422 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 MAGEB10Q96LZ2 347 aaPredicted RBP11.71□□□□□ -0.54
USF1-203ENST00000368021 KCNA7Q96RP8 456 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 PKP4Q99569 1192 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 GPR174Q9BXC1 333 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 DNAJC11Q9NVH1 559 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 ASF1AQ9Y294 204 aa11.71□□□□□ -0.54
USF1-203ENST00000368021 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.7□□□□□ -0.54
USF1-203ENST00000368021 PIP5K1BO14986 540 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 NDUFS2O75306 463 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 WDR47O94967 919 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 SLC35G4P0C7Q5 338 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 T-ENOLP0DO92 83 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 NCF2P19878 526 aaPredicted RBP11.7□□□□□ -0.54
USF1-203ENST00000368021 GSTT1P30711 240 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 CLCNKAP51800 687 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 PCDH1Q08174 1060 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 LRP8Q14114 963 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 MUM1Q2TAK8 710 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 CCSMST1Q4G0I0 132 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 CHSY3Q70JA7 882 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 LARP4Q71RC2 724 aaKnown RBP eCLIP11.7□□□□□ -0.54
USF1-203ENST00000368021 ASRGL1Q7L266 308 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 CPSF7Q8N684 471 aaKnown RBP11.7□□□□□ -0.54
USF1-203ENST00000368021 CDYL2Q8N8U2 506 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 OR5K2Q8NHB8 316 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 METTL6Q8TCB7 284 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 RAD51AP1Q96B01 352 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 ITPKCQ96DU7 683 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 OR2M4Q96R27 311 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 TUBB1Q9H4B7 451 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 MRPL40Q9NQ50 206 aaKnown RBP11.7□□□□□ -0.54
USF1-203ENST00000368021 ARMCX1Q9P291 453 aa11.7□□□□□ -0.54
USF1-203ENST00000368021 NCDNQ9UBB6 729 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms