RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 GPR135Q8IZ08 494 aa17.27■□□□□ 0.36
SNRPA1-201ENST00000254193 CT55Q8WUE5 264 aa17.27■□□□□ 0.36
SNRPA1-201ENST00000254193 CDKL2Q92772 493 aa17.27■□□□□ 0.36
SNRPA1-201ENST00000254193 CLIP3Q96DZ5 547 aa17.27■□□□□ 0.36
SNRPA1-201ENST00000254193 SLC45A3Q96JT2 553 aa17.27■□□□□ 0.36
SNRPA1-201ENST00000254193 MCMBPQ9BTE3 642 aa17.27■□□□□ 0.36
SNRPA1-201ENST00000254193 RHOJQ9H4E5 214 aa17.27■□□□□ 0.36
SNRPA1-201ENST00000254193 ACTR5Q9H9F9 607 aaPredicted RBP17.27■□□□□ 0.36
SNRPA1-201ENST00000254193 LRRC4CQ9HCJ2 640 aa17.27■□□□□ 0.36
SNRPA1-201ENST00000254193 ABCF3Q9NUQ8 709 aa17.27■□□□□ 0.36
SNRPA1-201ENST00000254193 INTS7Q9NVH2 962 aaKnown RBP17.27■□□□□ 0.36
SNRPA1-201ENST00000254193 EURLQ9NYK6 297 aa17.27■□□□□ 0.36
SNRPA1-201ENST00000254193 PLCL2Q9UPR0 1127 aa17.27■□□□□ 0.36
SNRPA1-201ENST00000254193 PDE10AQ9Y233 779 aa17.27■□□□□ 0.36
SNRPA1-201ENST00000254193 MRPS18BQ9Y676 258 aaKnown RBP17.27■□□□□ 0.36
SNRPA1-201ENST00000254193 FAM159BA6NKW6 160 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 E7ENX8 843 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 H3BMH7 237 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 TERTO14746 1132 aaKnown RBP17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 NRP2O60462 931 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 KATNA1O75449 491 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 FKBP9O95302 570 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 C1QAP02745 245 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 C8GP07360 202 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 GSTA2P09210 222 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 TCN2P20062 427 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 RPA3P35244 121 aaPredicted RBP17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 RHDQ02161 417 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 TAP2Q03519 686 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 ZNF460Q14592 562 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 PHKG1Q16816 387 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 LCN10Q6JVE6 187 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 MBOAT1Q6ZNC8 495 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 CTAGE3PQ8IX95 158 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 MCOLN3Q8TDD5 553 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 MR1Q95460 341 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 VPS39Q96JC1 886 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 BBC3Q96PG8 261 aaPredicted RBP17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 UBL7Q96S82 380 aaPredicted RBP17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 RUFY1Q96T51 708 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 EFHD1Q9BUP0 239 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 PARVBQ9HBI1 364 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 PCMTD2Q9NV79 361 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 IRAK4Q9NWZ3 460 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 TAC3Q9UHF0 121 aa17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 MTO1Q9Y2Z2 717 aaKnown RBP17.26■□□□□ 0.35
SNRPA1-201ENST00000254193 ZNF839A8K0R7 811 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 MEN1O00255 615 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 SLC16A5O15375 505 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 CTSVO60911 334 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 PRKAR1AP10644 381 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 IMPA1P29218 277 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 CMPK1P30085 196 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 RORAP35398 523 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 SP140Q13342 867 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 DNASE1L3Q13609 305 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 PTCHD3Q3KNS1 767 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 GLE1Q53GS7 698 aaKnown RBP17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 SOWAHCQ53LP3 525 aaPredicted RBP17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 PCSK4Q6UW60 755 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 CEP97Q8IW35 865 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 LRRC56Q8IYG6 542 aaPredicted RBP17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 ZNF655Q8N720 491 aaPredicted RBP17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 FBF1Q8TES7 1133 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 IFT81Q8WYA0 676 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 STARD8Q92502 1023 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 TTC9Q92623 222 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 ZUFSPQ96AP4 578 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 CCDC138Q96M89 665 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 CPNE1Q99829 537 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 DPH7Q9BTV6 452 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 SLC7A5P2Q9GIP4 190 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 CHST8Q9H2A9 424 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 SLC6A20Q9NP91 592 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 TXNDC16Q9P2K2 825 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 IKZF3Q9UKT9 509 aa17.25■□□□□ 0.35
SNRPA1-201ENST00000254193 FAM208BQ5VWN6 2430 aa17.24■□□□□ 0.35
SNRPA1-201ENST00000254193 ZNF891A8MT65 544 aaPredicted RBP17.24■□□□□ 0.35
SNRPA1-201ENST00000254193 TARM1B6A8C7 271 aa17.24■□□□□ 0.35
SNRPA1-201ENST00000254193 ZSCAN9O15535 394 aaPredicted RBP17.24■□□□□ 0.35
SNRPA1-201ENST00000254193 KLK3P07288 261 aaPredicted RBP17.24■□□□□ 0.35
SNRPA1-201ENST00000254193 KBTBD12Q3ZCT8 623 aa17.24■□□□□ 0.35
SNRPA1-201ENST00000254193 C16orf46Q6P387 395 aa17.24■□□□□ 0.35
SNRPA1-201ENST00000254193 DSELQ8IZU8 1212 aa17.24■□□□□ 0.35
SNRPA1-201ENST00000254193 PPM1NQ8N819 430 aa17.24■□□□□ 0.35
SNRPA1-201ENST00000254193 CEP112Q8N8E3 955 aa17.24■□□□□ 0.35
SNRPA1-201ENST00000254193 EXTL1Q92935 676 aa17.24■□□□□ 0.35
SNRPA1-201ENST00000254193 LRFN5Q96NI6 719 aa17.24■□□□□ 0.35
SNRPA1-201ENST00000254193 CAB39LQ9H9S4 337 aa17.24■□□□□ 0.35
SNRPA1-201ENST00000254193 MRPS30Q9NP92 439 aaKnown RBP17.24■□□□□ 0.35
SNRPA1-201ENST00000254193 STOX2Q9P2F5 926 aaPredicted RBP17.24■□□□□ 0.35
SNRPA1-201ENST00000254193 KLK4Q9Y5K2 254 aa17.24■□□□□ 0.35
SNRPA1-201ENST00000254193 AP1M2Q9Y6Q5 423 aa17.24■□□□□ 0.35
SNRPA1-201ENST00000254193 IGKV1-8A0A0C4DH67 115 aa17.23■□□□□ 0.35
SNRPA1-201ENST00000254193 A0A0J9YVX5 310 aa17.23■□□□□ 0.35
SNRPA1-201ENST00000254193 C21orf140B9A014 251 aa17.23■□□□□ 0.35
SNRPA1-201ENST00000254193 FAM155BO75949 473 aa17.23■□□□□ 0.35
SNRPA1-201ENST00000254193 ATXN8OSP0DMR3 200 aa17.23■□□□□ 0.35
SNRPA1-201ENST00000254193 ZNF37AP17032 561 aaPredicted RBP17.23■□□□□ 0.35
SNRPA1-201ENST00000254193 STX2P32856 288 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms