RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 PRMT5O14744 637 aaPredicted RBP16.91■□□□□ 0.3
SHKBP1-203ENST00000594298 USP1O94782 785 aa16.91■□□□□ 0.3
SHKBP1-203ENST00000594298 IGHEP01854 428 aa16.91■□□□□ 0.3
SHKBP1-203ENST00000594298 CD63P08962 238 aa16.91■□□□□ 0.3
SHKBP1-203ENST00000594298 SHMT2P34897 504 aa16.91■□□□□ 0.3
SHKBP1-203ENST00000594298 GABRA4P48169 554 aa16.91■□□□□ 0.3
SHKBP1-203ENST00000594298 PRKG2Q13237 762 aa16.91■□□□□ 0.3
SHKBP1-203ENST00000594298 MRPL49Q13405 166 aaKnown RBP16.91■□□□□ 0.3
SHKBP1-203ENST00000594298 EIF2S3LQ2VIR3 472 aaKnown RBP16.91■□□□□ 0.3
SHKBP1-203ENST00000594298 ANKRD20A4Q4UJ75 823 aa16.91■□□□□ 0.3
SHKBP1-203ENST00000594298 RHBDD2Q6NTF9 364 aa16.91■□□□□ 0.3
SHKBP1-203ENST00000594298 MRGPREQ86SM8 312 aa16.91■□□□□ 0.3
SHKBP1-203ENST00000594298 LMNTD2Q8IXW0 634 aa16.91■□□□□ 0.3
SHKBP1-203ENST00000594298 PDIK1LQ8N165 341 aa16.91■□□□□ 0.3
SHKBP1-203ENST00000594298 C19orf47Q8N9M1 422 aaKnown RBP16.91■□□□□ 0.3
SHKBP1-203ENST00000594298 PROKR1Q8TCW9 393 aa16.91■□□□□ 0.3
SHKBP1-203ENST00000594298 ZNF669Q96BR6 464 aaPredicted RBP16.91■□□□□ 0.3
SHKBP1-203ENST00000594298 SIGLEC10Q96LC7 697 aa16.91■□□□□ 0.3
SHKBP1-203ENST00000594298 CARD6Q9BX69 1037 aa16.91■□□□□ 0.3
SHKBP1-203ENST00000594298 FAM60AQ9NP50 221 aa16.91■□□□□ 0.3
SHKBP1-203ENST00000594298 PRSS21Q9Y6M0 314 aa16.91■□□□□ 0.3
SHKBP1-203ENST00000594298 WIPF3A6NGB9 483 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 OR1I1O60431 355 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 KLHL41O60662 606 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 OR2B3O76000 313 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 TTC4O95801 387 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 PGAM1P18669 254 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 OGNP20774 298 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 IVDP26440 423 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 OTX2P32243 289 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 SEMA3AQ14563 771 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 SYTL3Q4VX76 610 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 PTRHD1Q6GMV3 140 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 NEPROQ6NW34 567 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 IGFL3Q6UXB1 125 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 UNC5AQ6ZN44 842 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 MICALCLQ6ZW33 695 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 FLVCR1-AS1Q8TAF5 88 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 CALML6Q8TD86 181 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 N4BP2L2Q92802 583 aaPredicted RBP16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 SNRNP40Q96DI7 357 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 GBP5Q96PP8 586 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 PANX3Q96QZ0 392 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 OR2A14Q96R47 310 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 OR6C2Q9NZP2 312 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 MARCH4Q9P2E8 410 aaPredicted RBP16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 GNPTGQ9UJJ9 305 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 CDC23Q9UJX2 597 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 B3GNT3Q9Y2A9 372 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 PCSK5Q92824 1860 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 NBPF19A0A087WUL8 3843 aa16.9■□□□□ 0.3
SHKBP1-203ENST00000594298 SHANK1Q9Y566 2161 aa16.89■□□□□ 0.3
SHKBP1-203ENST00000594298 H3BMM5 538 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 KPNA5O15131 536 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 ALPPP05187 535 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 CBSLP0DN79 551 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 UGT2B7P16662 529 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 RPS3P23396 243 aaKnown RBP eCLIP16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 ACADLP28330 430 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 CBSP35520 551 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 ARL4CP56559 192 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 DCDP81605 110 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 RAPSNQ13702 412 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 MYBPC3Q14896 1274 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 ZIC1Q15915 447 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 LONRF1Q17RB8 773 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 PLEKHN1Q494U1 663 aaPredicted RBP16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 DCAF10Q5QP82 559 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 HIBCHQ6NVY1 386 aaPredicted RBP16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 LDB1Q86U70 411 aaPredicted RBP16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 TBC1D21Q8IYX1 336 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 IQCKQ8N0W5 287 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 CLEC1AQ8NC01 280 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 OR5AR1Q8NGP9 310 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 OR2Y1Q8NGV0 311 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 PRR7Q8TB68 274 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 LRRC39Q96DD0 335 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 C19orf60Q96EN9 201 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 TRIM51Q9BSJ1 452 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 TRIM31Q9BZY9 425 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 POLG2Q9UHN1 485 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 GPN3Q9UHW5 284 aaPredicted RBP16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 SRPK3Q9UPE1 567 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 ASF1AQ9Y294 204 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 FAM169AQ9Y6X4 670 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 MED13Q9UHV7 2174 aa16.89■□□□□ 0.29
SHKBP1-203ENST00000594298 SPTAN1Q13813 2472 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 PEX12O00623 359 aa16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 ZSCAN9O15535 394 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 HCRTR1O43613 425 aa16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 URI1O94763 535 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 IPO13O94829 963 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 SEC31AO94979 1220 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 CBX6O95503 412 aa16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 APOA4P06727 396 aa16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 CHRM5P08912 532 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 ARNTP27540 789 aa16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 FOLR3P41439 243 aa16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 ITGA8P53708 1063 aa16.88■□□□□ 0.29
SHKBP1-203ENST00000594298 SOX8P57073 446 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms