RNA–Protein interactions for RNA: ENST00000591994.1

RPRD1A-210, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 2

Gene RPRD1A, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-210ENST00000591994 FAM20AQ96MK3 541 aa2.17□□□□□ -2.06
RPRD1A-210ENST00000591994 LRRC3BQ96PB8 259 aa2.17□□□□□ -2.06
RPRD1A-210ENST00000591994 RAD9AQ99638 391 aa2.17□□□□□ -2.06
RPRD1A-210ENST00000591994 URM1Q9BTM9 101 aaKnown RBP2.17□□□□□ -2.06
RPRD1A-210ENST00000591994 KATNB1Q9BVA0 655 aa2.17□□□□□ -2.06
RPRD1A-210ENST00000591994 RBM4Q9BWF3 364 aaKnown RBP2.17□□□□□ -2.06
RPRD1A-210ENST00000591994 SLC2A11Q9BYW1 496 aa2.17□□□□□ -2.06
RPRD1A-210ENST00000591994 SIX2Q9NPC8 291 aa2.17□□□□□ -2.06
RPRD1A-210ENST00000591994 SLC52A3Q9NQ40 469 aa2.17□□□□□ -2.06
RPRD1A-210ENST00000591994 ADPRHL2Q9NX46 363 aa2.17□□□□□ -2.06
RPRD1A-210ENST00000591994 SMIM1B2RUZ4 78 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 NGFP01138 241 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 CD48P09326 243 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 FRMD6-AS1P0C7T7 363 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 GLULP15104 373 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 EEF1B2P24534 225 aaKnown RBP2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 PRKCIP41743 596 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 PPIGQ13427 754 aaKnown RBP eCLIP2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 CUL3Q13618 768 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 ITGA7Q13683 1181 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 UGT3A2Q3SY77 523 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 MCMDC2Q4G0Z9 681 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 XKR3Q5GH77 459 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 C11orf63Q6NUN7 778 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 CAVIN1Q6NZI2 390 aaKnown RBP2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 SHQ1Q6PI26 577 aaKnown RBP2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 MFSD6Q6ZSS7 791 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 FAM219AQ8IW50 185 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 THNSL1Q8IYQ7 743 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 EID3Q8N140 333 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 ZNF611Q8N823 705 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 BMPERQ8N8U9 685 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 IQUBQ8NA54 791 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 FNBP1Q96RU3 617 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 CCDC3Q9BQI4 270 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 EDEM3Q9BZQ6 932 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 SDR39U1Q9NRG7 319 aaPredicted RBP2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 WDR83OSQ9Y284 106 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 PMS2P5A8MQ11 134 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 CLIC2O15247 247 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 PRKRAO75569 313 aaKnown RBP2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 APOHP02749 345 aaPredicted RBP2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 CSN3P07498 182 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 INHBAP08476 426 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 QDPRP09417 244 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 EFNA1P20827 205 aaPredicted RBP2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 CDH3P22223 829 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 CD27P26842 260 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 CEACAM8P31997 349 aaPredicted RBP2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 LIMK1P53667 647 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 PPARDQ03181 441 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 TAF10Q12962 218 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 LBHQ53QV2 105 aaPredicted RBP2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 DNAJB7Q7Z6W7 309 aaPredicted RBP2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 TICAM2Q86XR7 235 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 DBF4BQ8NFT6 615 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 VANGL1Q8TAA9 524 aaPredicted RBP2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 RMDN2Q96LZ7 410 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 SPATA33Q96N06 139 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 Q9H8V8 135 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 CDH20Q9HBT6 801 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 DNAJC4Q9NNZ3 241 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 MRGBPQ9NV56 204 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 SPHK1Q9NYA1 384 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 TBC1D7Q9P0N9 293 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 POLLQ9UGP5 575 aa2.16□□□□□ -2.06
RPRD1A-210ENST00000591994 A0A1W2PN81 502 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 ARHGEF37A1IGU5 675 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 ANKRD61A6NGH8 418 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 ATP6V0E1O15342 81 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 DDHD2O94830 711 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 CAVIN2O95810 425 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 GSRP00390 522 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 PATE4P0C8F1 98 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 ERVK-10P10266 1014 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 TCF4P15884 667 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 ITGA3P26006 1051 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 CHRNA7P36544 502 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 GP5P40197 560 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 CRKLP46109 303 aaKnown RBP2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 ATP12AP54707 1039 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 TFCP2Q12800 502 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 GPR17Q13304 367 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 P2RY6Q15077 328 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 SLC25A53Q5H9E4 307 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 LCE1FQ5T754 118 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 CYP4A22Q5TCH4 519 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 C15orf39Q6ZRI6 1047 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 SH2D5Q6ZV89 423 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 SLC16A9Q7RTY1 509 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 ADCK2Q7Z695 626 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 NUDT13Q86X67 352 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 ZNF485Q8NCK3 441 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 PHLDA1Q8WV24 401 aaPredicted RBP2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 ZNF501Q96CX3 271 aaPredicted RBP2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 FAM71F1Q96KD3 344 aaPredicted RBP2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 GBP5Q96PP8 586 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 MGME1Q9BQP7 344 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 PRRG4Q9BZD6 226 aa2.15□□□□□ -2.06
RPRD1A-210ENST00000591994 OR2B2Q9GZK3 357 aa2.15□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms