RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 EHD3Q9NZN3 535 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 DKKL1Q9UK85 242 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 GPC6Q9Y625 555 aaPredicted RBP11.7□□□□□ -0.54
NEK9-210ENST00000557026 PEX10O60683 326 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 RHOP08100 348 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 PABPC4LP0CB38 370 aaKnown RBP11.7□□□□□ -0.54
NEK9-210ENST00000557026 EBLN1P0CF75 366 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 UNGP13051 313 aaPredicted RBP11.7□□□□□ -0.54
NEK9-210ENST00000557026 NCBP2P52298 156 aaKnown RBP eCLIP11.7□□□□□ -0.54
NEK9-210ENST00000557026 NAA30Q147X3 362 aaPredicted RBP11.7□□□□□ -0.54
NEK9-210ENST00000557026 CYP1B1Q16678 543 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 ADNP2Q6IQ32 1131 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 RPL13AP3Q6NVV1 102 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 LRP10Q7Z4F1 713 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 DAW1Q8N136 415 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 RCN3Q96D15 328 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 CDKN2AIPNLQ96HQ2 116 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 DPEP3Q9H4B8 488 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 ASB6Q9NWX5 421 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 RPL36Q9Y3U8 105 aaKnown RBP11.7□□□□□ -0.54
NEK9-210ENST00000557026 ENTPD2Q9Y5L3 495 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 SAGE2PA6NJ88 616 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 GJE1A6NN92 205 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 PIRO00625 290 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 LRATO95237 230 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 KLF8O95600 359 aaPredicted RBP11.7□□□□□ -0.54
NEK9-210ENST00000557026 HNRNPLP14866 589 aaKnown RBP eCLIP11.7□□□□□ -0.543e-6■■□□□ 11.6
NEK9-210ENST00000557026 CCR10P46092 362 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 ALDH3A2P51648 485 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 CLCNKAP51800 687 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 CAPZA1P52907 286 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 PER3P56645 1201 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 SLBPQ14493 270 aaKnown RBP eCLIP11.7□□□□□ -0.54
NEK9-210ENST00000557026 ARL10Q8N8L6 244 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 TSPEARQ8WU66 669 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 NXNL1Q96CM4 212 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 GORASP1Q9BQQ3 440 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 DUSP23Q9BVJ7 150 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 METTL7AQ9H8H3 244 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 DTLQ9NZJ0 730 aa11.7□□□□□ -0.54
NEK9-210ENST00000557026 A6NCN8 305 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 ANKRD66B4E2M5 251 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 MUSKO15146 869 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 DNAJA1P31689 397 aaKnown RBP11.69□□□□□ -0.54
NEK9-210ENST00000557026 SLC1A2P43004 574 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 HERVK_113P63132 956 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 RPA4Q13156 261 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 ECM1Q16610 540 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 TMEM35AQ53FP2 167 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 FRG2Q64ET8 278 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 GTF2IRD2BQ6EKJ0 949 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 GTF2IRD2Q86UP8 949 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 FAM86B1Q8N7N1 296 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 SLC5A11Q8WWX8 675 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 KCNJ9Q92806 393 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 TRNT1Q96Q11 434 aaKnown RBP11.69□□□□□ -0.54
NEK9-210ENST00000557026 FRG2BQ96QU4 278 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 RBP7Q96R05 134 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 LGR4Q9BXB1 951 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 ERVK-6Q9BXR3 956 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 ARMCX1Q9P291 453 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 CICQ96RK0 1608 aaPredicted RBP11.69□□□□□ -0.54
NEK9-210ENST00000557026 CCDC182A6NF36 153 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 HAS3O00219 553 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 ABLIM1O14639 778 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 ITGA10O75578 1167 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 MT-CYBP00156 380 aaPredicted RBP11.69□□□□□ -0.54
NEK9-210ENST00000557026 ZNF20P17024 532 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 ALOX12P18054 663 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 CDH13P55290 713 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 DSG2Q14126 1118 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 PLEKHG6Q3KR16 790 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 TNFAIP8L3Q5GJ75 292 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 BPIFB6Q8NFQ5 453 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 RARRES3Q9UL19 164 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 IGFBP5P24593 272 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 RPL10P27635 214 aaKnown RBP11.69□□□□□ -0.54
NEK9-210ENST00000557026 RPL5P46777 297 aaKnown RBP11.69□□□□□ -0.54
NEK9-210ENST00000557026 IL18R1Q13478 541 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 NAT6Q93015 286 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 CLPTM1LQ96KA5 538 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 GRIP2Q9C0E4 1043 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 DERL2Q9GZP9 239 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 ZCCHC3Q9NUD5 404 aaKnown RBP11.69□□□□□ -0.54
NEK9-210ENST00000557026 KLRF1Q9NZS2 232 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 DAPK2Q9UIK4 370 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 CST5P28325 142 aaPredicted RBP11.69□□□□□ -0.54
NEK9-210ENST00000557026 ERFP50548 548 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 CLCN4P51793 760 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 GBX2P52951 348 aaPredicted RBP11.69□□□□□ -0.54
NEK9-210ENST00000557026 SLC18A1P54219 525 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 MC1RQ01726 317 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 SLC30A6Q6NXT4 461 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 CMTM8Q8IZV2 173 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 GEMIN6Q8WXD5 167 aaKnown RBP11.69□□□□□ -0.54
NEK9-210ENST00000557026 TMCO6Q96DC7 493 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 CHMP1AQ9HD42 196 aaPredicted RBP11.69□□□□□ -0.54
NEK9-210ENST00000557026 TMEM138Q9NPI0 162 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 RNF19AQ9NV58 838 aa11.69□□□□□ -0.54
NEK9-210ENST00000557026 ALKBH4Q9NXW9 302 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms