RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 TP53INP2Q8IXH6 220 aa16.93■□□□□ 0.3
PTPN21-208ENST00000556564 C2CD4AQ8NCU7 369 aaPredicted RBP16.93■□□□□ 0.3
PTPN21-208ENST00000556564 CENPIQ92674 756 aaPredicted RBP16.93■□□□□ 0.3
PTPN21-208ENST00000556564 MR1Q95460 341 aa16.93■□□□□ 0.3
PTPN21-208ENST00000556564 ARHGAP9Q9BRR9 750 aa16.93■□□□□ 0.3
PTPN21-208ENST00000556564 TBC1D23Q9NUY8 699 aa16.93■□□□□ 0.3
PTPN21-208ENST00000556564 GALPQ9UBC7 116 aa16.93■□□□□ 0.3
PTPN21-208ENST00000556564 SNX7Q9UNH6 387 aa16.93■□□□□ 0.3
PTPN21-208ENST00000556564 ZNF217O75362 1048 aa16.93■□□□□ 0.3
PTPN21-208ENST00000556564 FABP3P05413 133 aa16.93■□□□□ 0.3
PTPN21-208ENST00000556564 OR10A6Q8NH74 314 aa16.93■□□□□ 0.3
PTPN21-208ENST00000556564 SSU72Q9NP77 194 aaKnown RBP16.93■□□□□ 0.3
PTPN21-208ENST00000556564 PEX12O00623 359 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 XKRYO14609 159 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 ITM2AO43736 263 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 GIMD1P0DJR0 217 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 CCR10P46092 362 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 PTCHD3Q3KNS1 767 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 MTX3Q5HYI7 312 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 PTCHD4Q6ZW05 846 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 GSTCDQ8NEC7 633 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 Q96MT0 163 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 RBCK1Q9BYM8 510 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 MCM8Q9UJA3 840 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 AP2A2O94973 939 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 C8orf89P0DMQ9 161 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 DRD1P21728 446 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 UTS2RQ9UKP6 389 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 ACSL5Q9ULC5 683 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 IFNGP01579 166 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 ADRB3P13945 408 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 NCK1P16333 377 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 VSX2P58304 361 aaPredicted RBP16.92■□□□□ 0.3
PTPN21-208ENST00000556564 RPS13P62277 151 aaKnown RBP16.92■□□□□ 0.3
PTPN21-208ENST00000556564 SLCO2A1Q92959 643 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 CLPTM1LQ96KA5 538 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 OXSMQ9NWU1 459 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 FAM221BA6H8Z2 402 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 C2orf74A8MZ97 194 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 IL7RP16871 459 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 KLF1Q13351 362 aaPredicted RBP16.92■□□□□ 0.3
PTPN21-208ENST00000556564 SHHQ15465 462 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 FRG2Q64ET8 278 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 OR4F6Q8NGB9 312 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 SLC13A3Q8WWT9 602 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 FRG2BQ96QU4 278 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 SLC46A2Q9BY10 475 aa16.92■□□□□ 0.3
PTPN21-208ENST00000556564 C6orf62Q9GZU0 229 aaPredicted RBP16.92■□□□□ 0.3
PTPN21-208ENST00000556564 SMIM31A0A1B0GVY4 71 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 TRIM43BA6NCK2 446 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 TMEM189-UBE2V1I3L0A0 370 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 FAM91A1Q658Y4 838 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 CLNKQ7Z7G1 428 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 SAMD14Q8IZD0 417 aaPredicted RBP16.91■□□□□ 0.3
PTPN21-208ENST00000556564 NPWQ8N729 165 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 C11orf65Q8NCR3 313 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 ZDHHC12Q96GR4 267 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 DERL2Q9GZP9 239 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 PAPOLBQ9NRJ5 636 aaKnown RBP16.91■□□□□ 0.3
PTPN21-208ENST00000556564 DNMT3BQ9UBC3 853 aaKnown RBP16.91■□□□□ 0.3
PTPN21-208ENST00000556564 RNF11Q9Y3C5 154 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 ABCA3Q99758 1704 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 ENTPD5O75356 428 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 LGALS3BPQ08380 585 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 TSPAN33Q86UF1 283 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 HPS6Q86YV9 775 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 IGDCC3Q8IVU1 814 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 HEBP1Q9NRV9 189 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 C3orf18Q9UK00 162 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 ZNF487B1APH4 448 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 DLGAP3O95886 979 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 ADSLP30566 484 aaPredicted RBP16.91■□□□□ 0.3
PTPN21-208ENST00000556564 PDP1Q9P0J1 537 aaPredicted RBP16.91■□□□□ 0.3
PTPN21-208ENST00000556564 EFCAB10A6NFE3 127 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 OAS1P00973 400 aaKnown RBP16.91■□□□□ 0.3
PTPN21-208ENST00000556564 HEXBP07686 556 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 SYPP08247 313 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 SRCP12931 536 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 PTX3P26022 381 aaPredicted RBP16.91■□□□□ 0.3
PTPN21-208ENST00000556564 CSTF1Q05048 431 aaKnown RBP16.91■□□□□ 0.3
PTPN21-208ENST00000556564 FAM26DQ5JW98 314 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 RANBP3LQ86VV4 465 aaPredicted RBP16.91■□□□□ 0.3
PTPN21-208ENST00000556564 PEX5LQ8IYB4 626 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 KCNH6Q9H252 994 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 RETREG1Q9H6L5 497 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 NECTIN3Q9NQS3 549 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 LATO43561 262 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 ANPEPP15144 967 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 KLF16Q9BXK1 252 aaPredicted RBP16.91■□□□□ 0.3
PTPN21-208ENST00000556564 CALML5Q9NZT1 146 aa16.91■□□□□ 0.3
PTPN21-208ENST00000556564 GALK1P51570 392 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 ACSBG2Q5FVE4 666 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 CRTC1Q6UUV9 634 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 DEPDC4Q8N2C3 294 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 ZNF540Q8NDQ6 660 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 ZNF671Q8TAW3 534 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 ARMC5Q96C12 935 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 FCRL3Q96P31 734 aaPredicted RBP16.9■□□□□ 0.3
PTPN21-208ENST00000556564 OR51B5Q9H339 312 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 SUSD2Q9UGT4 822 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms