RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 NRP2O60462 931 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 DXOO77932 396 aaKnown RBP12.37□□□□□ -0.43
VEGFA-224ENST00000523873 ZBTB11O95625 1053 aaPredicted RBP12.37□□□□□ -0.43
VEGFA-224ENST00000523873 GUCA1CO95843 209 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 SHBGP04278 402 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 SLC35E2BP0CK96 405 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 CCDC166P0CW27 439 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 CD1DP15813 335 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 OAS2P29728 719 aaKnown RBP12.37□□□□□ -0.43
VEGFA-224ENST00000523873 SLC5A2P31639 672 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 TSPAN7P41732 249 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 MC2RQ01718 297 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 SP140Q13342 867 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 TSNQ15631 228 aaKnown RBP12.37□□□□□ -0.43
VEGFA-224ENST00000523873 SLC5A12Q1EHB4 618 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 DEFB110Q30KQ9 67 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 KIAA1614Q5VZ46 1190 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 SBSNQ6UWP8 590 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 LRRC56Q8IYG6 542 aaPredicted RBP12.37□□□□□ -0.43
VEGFA-224ENST00000523873 SYTL1Q8IYJ3 562 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 HMGCLL1Q8TB92 370 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 MCOLN3Q8TDD5 553 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 ALKBH8Q96BT7 664 aaKnown RBP12.37□□□□□ -0.43
VEGFA-224ENST00000523873 PDLIM5Q96HC4 596 aaKnown RBP12.37□□□□□ -0.43
VEGFA-224ENST00000523873 NAF1Q96HR8 494 aaKnown RBP12.37□□□□□ -0.43
VEGFA-224ENST00000523873 TAAR9Q96RI9 348 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 MIPEPQ99797 713 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 PARD6BQ9BYG5 372 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 ATG10Q9H0Y0 220 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 PARVBQ9HBI1 364 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 FAM60AQ9NP50 221 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 RRAGDQ9NQL2 400 aaPredicted RBP12.37□□□□□ -0.43
VEGFA-224ENST00000523873 SNX15Q9NRS6 342 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.37□□□□□ -0.43
VEGFA-224ENST00000523873 STOX2Q9P2F5 926 aaPredicted RBP12.37□□□□□ -0.43
VEGFA-224ENST00000523873 CTNNAL1Q9UBT7 734 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 BTRCQ9Y297 605 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 TRIM49D1C9J1S8 452 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 E7ENX8 843 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 TIAF1O95411 115 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 ALDOAP04075 364 aaKnown RBP12.36□□□□□ -0.43
VEGFA-224ENST00000523873 C2P06681 752 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 CTSBP07858 339 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 ZNF28P17035 718 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 MAGP20916 626 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 MLLT3P42568 568 aaPredicted RBP12.36□□□□□ -0.43
VEGFA-224ENST00000523873 SERPINB8P50452 374 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 HSD11B2P80365 405 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 TAP2Q03519 686 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 ILF2Q12905 390 aaKnown RBP12.36□□□□□ -0.43
VEGFA-224ENST00000523873 OR4D1Q15615 310 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 SF1Q15637 639 aaKnown RBP12.36□□□□□ -0.43
VEGFA-224ENST00000523873 PPP1R3AQ16821 1122 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 ZXDCQ2QGD7 858 aaPredicted RBP12.36□□□□□ -0.43
VEGFA-224ENST00000523873 C18orf21Q32NC0 220 aaPredicted RBP12.36□□□□□ -0.43
VEGFA-224ENST00000523873 AGTRAPQ6RW13 159 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 IGF2-ASQ6U949 168 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 CDHR3Q6ZTQ4 885 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 CLEC14AQ86T13 490 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 ZFAND4Q86XD8 727 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 KMT5CQ86Y97 462 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 LSMEM2Q8N112 164 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 D2HGDHQ8N465 521 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 C19orf47Q8N9M1 422 aaKnown RBP12.36□□□□□ -0.43
VEGFA-224ENST00000523873 OR2A1Q8NGT9 310 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 AENQ8WTP8 325 aaKnown RBP12.36□□□□□ -0.43
VEGFA-224ENST00000523873 KCTD4Q8WVF5 259 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 SMPDL3AQ92484 453 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 EXT2Q93063 718 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 PTERQ96BW5 349 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 NXNL1Q96CM4 212 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 DHRS4Q9BTZ2 278 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 DERL2Q9GZP9 239 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 VPS11Q9H270 941 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 SLC6A20Q9NP91 592 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 THSD1Q9NS62 852 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 IGSF5Q9NSI5 407 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 ARL15Q9NXU5 204 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 TAC3Q9UHF0 121 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 RAXQ9Y2V3 346 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 IKBKGQ9Y6K9 419 aa12.36□□□□□ -0.43
VEGFA-224ENST00000523873 URB1O60287 2271 aaKnown RBP12.36□□□□□ -0.43
VEGFA-224ENST00000523873 SCN3AQ9NY46 2000 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 A0A096LPK6 155 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 HIST1H2AGP0C0S8 130 aaPredicted RBP12.35□□□□□ -0.43
VEGFA-224ENST00000523873 HIST1H2ADP20671 130 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 CRABP2P29373 138 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 TYK2P29597 1187 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 RPA3P35244 121 aaPredicted RBP12.35□□□□□ -0.43
VEGFA-224ENST00000523873 HSD17B3P37058 310 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 GRIA3P42263 894 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 CSRP3P50461 194 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 TBPL1P62380 186 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 TUBB4BP68371 445 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 TUBB3Q13509 450 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 NAE1Q13564 534 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 ARHGAP19Q14CB8 494 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 FBXO48Q5FWF7 155 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 DCAF12Q5T6F0 453 aa12.35□□□□□ -0.43
VEGFA-224ENST00000523873 PRAMEF17Q5VTA0 474 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms