RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 THAP3Q8WTV1 239 aaPredicted RBP12□□□□□ -0.49
DDX41-215ENST00000512431 SYN2Q92777 582 aaPredicted RBP12□□□□□ -0.49
DDX41-215ENST00000512431 RNF25Q96BH1 459 aaPredicted RBP12□□□□□ -0.49
DDX41-215ENST00000512431 TMUB1Q9BVT8 246 aa12□□□□□ -0.49
DDX41-215ENST00000512431 HSD3B7Q9H2F3 369 aa12□□□□□ -0.49
DDX41-215ENST00000512431 RIC8BQ9NVN3 520 aa12□□□□□ -0.49
DDX41-215ENST00000512431 COQ3Q9NZJ6 369 aa12□□□□□ -0.49
DDX41-215ENST00000512431 TRHDEQ9UKU6 1024 aa12□□□□□ -0.49
DDX41-215ENST00000512431 ZNF835Q9Y2P0 537 aa12□□□□□ -0.49
DDX41-215ENST00000512431 DOCK10Q96BY6 2186 aa12□□□□□ -0.49
DDX41-215ENST00000512431 ANKRD12Q6UB98 2062 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 C3orf70A6NLC5 250 aaPredicted RBP11.99□□□□□ -0.49
DDX41-215ENST00000512431 FOXO6A8MYZ6 492 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 TTI1O43156 1089 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 SRPX2O60687 465 aaPredicted RBP11.99□□□□□ -0.49
DDX41-215ENST00000512431 ANXA9O76027 345 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 AP2A2O94973 939 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 KRT1P04264 644 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 COX6A1P12074 109 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 MCM3P25205 808 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 ACRV1P26436 265 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 GRIA3P42263 894 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 ARHGAP25P42331 645 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 EMP2P54851 167 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 PPP2R2AP63151 447 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 PLOD1Q02809 727 aaPredicted RBP11.99□□□□□ -0.49
DDX41-215ENST00000512431 TFDP2Q14188 446 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 BRD3Q15059 726 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 CDSNQ15517 529 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 SF1Q15637 639 aaKnown RBP11.99□□□□□ -0.49
DDX41-215ENST00000512431 SYTL3Q4VX76 610 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 FIGNQ5HY92 759 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 FIGLAQ6QHK4 219 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 Q6ZPB1 254 aaPredicted RBP11.99□□□□□ -0.49
DDX41-215ENST00000512431 SERPINA9Q86WD7 417 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 ZNF567Q8N184 647 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 OR13C4Q8NGS5 318 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 ELMO1Q92556 727 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 P3H4Q92791 437 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 GPR137Q96N19 417 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 MESP1Q9BRJ9 268 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 ANP32EQ9BTT0 268 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 FICDQ9BVA6 458 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 YIPF2Q9BWQ6 316 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 PLAGL1Q9UM63 463 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 PCDHGB6Q9Y5F9 930 aa11.99□□□□□ -0.49
DDX41-215ENST00000512431 IGLV3-16A0A075B6K0 115 aa11.98□□□□□ -0.49
DDX41-215ENST00000512431 IGHV1-45A0A0A0MS14 117 aa11.98□□□□□ -0.49
DDX41-215ENST00000512431 HYKKA2RU49 373 aa11.98□□□□□ -0.49
DDX41-215ENST00000512431 QSOX1O00391 747 aa11.98□□□□□ -0.49
DDX41-215ENST00000512431 FTH1P02794 183 aa11.98□□□□□ -0.49
DDX41-215ENST00000512431 TPBGLP0DKB5 382 aa11.98□□□□□ -0.49
DDX41-215ENST00000512431 ABOP16442 354 aa11.98□□□□□ -0.49
DDX41-215ENST00000512431 ACADLP28330 430 aa11.98□□□□□ -0.49
DDX41-215ENST00000512431 PEBP1P30086 187 aaKnown RBP11.98□□□□□ -0.49
DDX41-215ENST00000512431 MC4RP32245 332 aa11.98□□□□□ -0.49
DDX41-215ENST00000512431 VSX2P58304 361 aaPredicted RBP11.98□□□□□ -0.49
DDX41-215ENST00000512431 PMP22Q01453 160 aa11.98□□□□□ -0.49
DDX41-215ENST00000512431 ALDH6A1Q02252 535 aaKnown RBP11.98□□□□□ -0.49
DDX41-215ENST00000512431 EEF1A2Q05639 463 aaKnown RBP11.98□□□□□ -0.49
DDX41-215ENST00000512431 ZNF33BQ06732 778 aa11.98□□□□□ -0.49
DDX41-215ENST00000512431 ZNF766Q5HY98 468 aa11.98□□□□□ -0.49
DDX41-215ENST00000512431 WASHC2DQ5SRD0 308 aa11.98□□□□□ -0.49
DDX41-215ENST00000512431 RBM43Q6ZSC3 357 aaKnown RBP11.98□□□□□ -0.49
DDX41-215ENST00000512431 CLDN19Q8N6F1 224 aa11.98□□□□□ -0.49
DDX41-215ENST00000512431 LRRC45Q96CN5 670 aa11.98□□□□□ -0.49
DDX41-215ENST00000512431 C19orf43Q9BQ61 176 aa11.98□□□□□ -0.49
DDX41-215ENST00000512431 NAT10Q9H0A0 1025 aaKnown RBP11.98□□□□□ -0.49
DDX41-215ENST00000512431 DDX56Q9NY93 547 aaKnown RBP11.98□□□□□ -0.49
DDX41-215ENST00000512431 SAE1Q9UBE0 346 aaPredicted RBP11.98□□□□□ -0.49
DDX41-215ENST00000512431 FAM169AQ9Y6X4 670 aa11.98□□□□□ -0.49
DDX41-215ENST00000512431 FITM1A5D6W6 292 aa11.97□□□□□ -0.49
DDX41-215ENST00000512431 SMTNL1A8MU46 457 aa11.97□□□□□ -0.49
DDX41-215ENST00000512431 IDSB3KWA1 339 aa11.97□□□□□ -0.49
DDX41-215ENST00000512431 PRPF4O43172 522 aaKnown RBP eCLIP11.97□□□□□ -0.496e-6■■■■□ 20.1
DDX41-215ENST00000512431 ZRANB2O95218 330 aaKnown RBP eCLIP11.97□□□□□ -0.49
DDX41-215ENST00000512431 S1PR4O95977 384 aa11.97□□□□□ -0.49
DDX41-215ENST00000512431 RPN2P04844 631 aa11.97□□□□□ -0.49
DDX41-215ENST00000512431 HEXBP07686 556 aa11.97□□□□□ -0.49
DDX41-215ENST00000512431 CD9P21926 228 aa11.97□□□□□ -0.49
DDX41-215ENST00000512431 FBLP22087 321 aaKnown RBP11.97□□□□□ -0.49
DDX41-215ENST00000512431 PKLRP30613 574 aa11.97□□□□□ -0.49
DDX41-215ENST00000512431 CDKN1CP49918 316 aaPredicted RBP11.97□□□□□ -0.49
DDX41-215ENST00000512431 ARHGEF18Q6ZSZ5 1173 aa11.97□□□□□ -0.49
DDX41-215ENST00000512431 TMEM200AQ86VY9 491 aa11.97□□□□□ -0.49
DDX41-215ENST00000512431 DNAAF3Q8N9W5 541 aa11.97□□□□□ -0.49
DDX41-215ENST00000512431 PHF10Q8WUB8 498 aaKnown RBP11.97□□□□□ -0.49
DDX41-215ENST00000512431 ZUFSPQ96AP4 578 aa11.97□□□□□ -0.49
DDX41-215ENST00000512431 SDCCAG3Q96C92 435 aa11.97□□□□□ -0.49
DDX41-215ENST00000512431 FERMT1Q9BQL6 677 aa11.97□□□□□ -0.49
DDX41-215ENST00000512431 ENAMQ9NRM1 1142 aa11.97□□□□□ -0.49
DDX41-215ENST00000512431 SMARCAL1Q9NZC9 954 aa11.97□□□□□ -0.49
DDX41-215ENST00000512431 ZC3H7BQ9UGR2 993 aaKnown RBP11.97□□□□□ -0.49
DDX41-215ENST00000512431 CDC14AQ9UNH5 594 aa11.97□□□□□ -0.49
DDX41-215ENST00000512431 AAR2Q9Y312 384 aaKnown RBP11.97□□□□□ -0.49
DDX41-215ENST00000512431 PCNX1Q96RV3 2341 aa11.97□□□□□ -0.49
DDX41-215ENST00000512431 MTORP42345 2549 aa11.96□□□□□ -0.49
DDX41-215ENST00000512431 CNTRLQ7Z7A1 2325 aa11.96□□□□□ -0.49
DDX41-215ENST00000512431 TARM1B6A8C7 271 aa11.96□□□□□ -0.49
DDX41-215ENST00000512431 NPIPA5E9PKD4 350 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms