RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 C21orf59P57076 290 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 RPS8P62241 208 aaKnown RBP4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 KCNJ2P63252 427 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 PRAMEP78395 509 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 CCNA1P78396 465 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 B4GALNT1Q00973 533 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 FOXO1Q12778 655 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 CDC16Q13042 620 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 BAMBIQ13145 260 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 MED21Q13503 144 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 KLF9Q13886 244 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 GIT2Q14161 759 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 KRT81Q14533 505 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 MXD4Q14582 209 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 C16orf72Q14CZ0 275 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 SF3B4Q15427 424 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 RBMS2Q15434 407 aaKnown RBP4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 SEC23BQ15437 767 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 ASIC2Q16515 512 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 HLFQ16534 295 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 CAMK4Q16566 473 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 TRIM16LQ309B1 348 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 CEP55Q53EZ4 464 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 XKR9Q5GH70 373 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 XKR3Q5GH77 459 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 ERMARDQ5T6L9 678 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 INTS11Q5TA45 600 aaKnown RBP4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 TTC22Q5TAA0 569 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 ARHGEF16Q5VV41 709 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 C1orf146Q5VVC0 180 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 SUSD4Q5VX71 490 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 RESP18Q5W5W9 173 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 CYB5R4Q7L1T6 521 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 NIPA1Q7RTP0 329 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 TRAPPC11Q7Z392 1133 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 HAUS6Q7Z4H7 955 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 SLC9B2Q86UD5 537 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 ERO1BQ86YB8 467 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 RFX6Q8HWS3 928 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 RHPN2Q8IUC4 686 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 IQCKQ8N0W5 287 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 ARFGAP1Q8N6T3 406 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 NAT8LQ8N9F0 302 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 GOT1L1Q8NHS2 421 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 ADAMTS16Q8TE57 1224 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 SCARB1Q8WTV0 552 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 DEPDC1BQ8WUY9 529 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 KCTD4Q8WVF5 259 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 SLC44A1Q8WWI5 657 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 SHC3Q92529 594 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 RAB7BQ96AH8 199 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 ERLEC1Q96DZ1 483 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 GPR78Q96P69 363 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 ZIM3Q96PE6 472 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 MEIS3Q99687 375 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 DDX50Q9BQ39 737 aaKnown RBP4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 ZNF717Q9BY31 904 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 DPH5Q9H2P9 285 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 PABPC3Q9H361 631 aaKnown RBP4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 TASP1Q9H6P5 420 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 MLXIPQ9HAP2 919 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 RAVER2Q9HCJ3 691 aaKnown RBP4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 DECR2Q9NUI1 292 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 DDX28Q9NUL7 540 aaKnown RBP4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 FGFR1OP2Q9NVK5 253 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 ZDHHC7Q9NXF8 308 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 ELOVL5Q9NYP7 299 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 RRN3Q9NYV6 651 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 STX18Q9P2W9 335 aaKnown RBP4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 RNF14Q9UBS8 474 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 FBXO40Q9UH90 709 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 CNTN6Q9UQ52 1028 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 GPR52Q9Y2T5 361 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 ARL2BPQ9Y2Y0 163 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 TRPV2Q9Y5S1 764 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 SAR1BQ9Y6B6 198 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 DGKBQ9Y6T7 804 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 LTN1O94822 1766 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 CRYBG1Q9Y4K1 1723 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 USP42Q9H9J4 1324 aaKnown RBP4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 LOC105369274A0A096LPK9 316 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 LOC102723532A0A0G2JNH3 316 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 LOC390937A0A1W2PQ73 354 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 ARGFXA6NJG6 315 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 AQP12BA6NM10 295 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 TCP11X1B4DZS4 312 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 EYA2O00167 538 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 TAF4O00268 1085 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 LAD1O00515 517 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 PER2O15055 1255 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 PLOD3O60568 738 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 PPP6R2O75170 966 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 CDH16O75309 829 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 CNTN5O94779 1100 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 NFATC1O95644 943 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 CLPTM1O96005 669 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 OPN1MWP04001 364 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 SERPINB2P05120 415 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms