RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 LRRC18Q8N456 261 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 ZNF561Q8N587 486 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 OR2L8Q8NGY9 312 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 ACTRT1Q8TDG2 376 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 TRIB2Q92519 343 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 UTP4Q969X6 686 aaKnown RBP4.86□□□□□ -1.63
EPHA3-202ENST00000452448 MVB12AQ96EY5 273 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 CALML4Q96GE6 196 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 ZNF597Q96LX8 424 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 MAGEB10Q96LZ2 347 aaPredicted RBP4.86□□□□□ -1.63
EPHA3-202ENST00000452448 NECAB3Q96P71 396 aaPredicted RBP4.86□□□□□ -1.63
EPHA3-202ENST00000452448 BTBD9Q96Q07 612 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 INTS14Q96SY0 518 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 CITED1Q99966 193 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 BDH2Q9BUT1 245 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 NLNQ9BYT8 704 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 ADAM7Q9H2U9 754 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 SPNS1Q9H2V7 528 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 GAL3ST2Q9H3Q3 398 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 GSX1Q9H4S2 264 aaPredicted RBP4.86□□□□□ -1.63
EPHA3-202ENST00000452448 CHODLQ9H9P2 273 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 MYOZ1Q9NP98 299 aaPredicted RBP4.86□□□□□ -1.63
EPHA3-202ENST00000452448 PRDM7Q9NQW5 492 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 DUSP22Q9NRW4 184 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 ING3Q9NXR8 418 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 NKIRAS1Q9NYS0 192 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 HAO1Q9UJM8 370 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 NDRG2Q9UN36 371 aaKnown RBP4.86□□□□□ -1.63
EPHA3-202ENST00000452448 ADAMTS5Q9UNA0 930 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 AP4B1Q9Y6B7 739 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 BRWD3Q6RI45 1802 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 E5RI56 91 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 E9PI62 339 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 I3L521 148 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 NFKBIEO00221 500 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 GRM8O00222 908 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 CBX4O00257 560 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 CTDSP2O14595 271 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 ZBTB5O15062 677 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 FOXN1O15353 648 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 ARPC5O15511 151 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 PSMD3O43242 534 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 ADAM20O43506 726 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 BUD23O43709 281 aaKnown RBP4.86□□□□□ -1.63
EPHA3-202ENST00000452448 ITM2AO43736 263 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 UGT1A9O60656 530 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 ENTPD5O75356 428 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 NOL4O94818 638 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 LY86O95711 162 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 AK1P00568 194 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 CRHP06850 196 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 GUSBP08236 651 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 MMP3P08254 477 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 SUPT20HL2P0C7V6 817 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 PEPDP12955 493 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 HOXD8P13378 290 aaPredicted RBP4.86□□□□□ -1.63
EPHA3-202ENST00000452448 CCNB1P14635 433 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 FOSL2P15408 326 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 UGT1A6P19224 532 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 C5AR1P21730 350 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 UGT1A1P22309 533 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 UGT1A4P22310 534 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 HTR1BP28222 390 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 CD1BP29016 333 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 PTPN4P29074 926 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 UGT1A3P35503 534 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 UGT1A5P35504 534 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 CAPGP40121 348 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 ALDH3B1P43353 468 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 SLC11A2P49281 568 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 CDK9P50750 372 aaKnown RBP4.86□□□□□ -1.63
EPHA3-202ENST00000452448 ZNF157P51786 506 aaPredicted RBP4.86□□□□□ -1.63
EPHA3-202ENST00000452448 ZNF41P51814 821 aaPredicted RBP4.86□□□□□ -1.63
EPHA3-202ENST00000452448 NDST2P52849 883 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 PLK1P53350 603 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 SOX8P57073 446 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 PRPS1P60891 318 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 ADGRE1Q14246 886 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 ZNF169Q14929 603 aaPredicted RBP4.86□□□□□ -1.63
EPHA3-202ENST00000452448 MTFR1Q15390 333 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 CLEC16AQ2KHT3 1053 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 RFX4Q33E94 735 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 USP41Q3LFD5 358 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 ZNF568Q3ZCX4 644 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 C4orf17Q53FE4 359 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 ARHGAP40Q5TG30 622 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 TYW3Q6IPR3 259 aaKnown RBP4.86□□□□□ -1.63
EPHA3-202ENST00000452448 TTC27Q6P3X3 843 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 USP17L6PQ6QN14 398 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 IZUMO2Q6UXV1 221 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 RAB44Q7Z6P3 723 aaPredicted RBP4.86□□□□□ -1.63
EPHA3-202ENST00000452448 NT5DC3Q86UY8 548 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 GPBP1Q86WP2 473 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 TGIF2LXQ8IUE1 241 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 SIAH1Q8IUQ4 282 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 LACC1Q8IV20 430 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 GID4Q8IVV7 300 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 MEIOBQ8N635 442 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 NETO2Q8NC67 525 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 PCDH19Q8TAB3 1148 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms