RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 LRMDAQ9H2I8 198 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 PIGMQ9H3S5 423 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 OSGEPL1Q9H4B0 414 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 EPB41L5Q9HCM4 733 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 INTS9Q9NV88 658 aaKnown RBP4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 CYP39A1Q9NYL5 469 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 WSB2Q9NYS7 404 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 PTTG2Q9NZH5 202 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 SUN2Q9UH99 717 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 TINAGQ9UJW2 476 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 ARL2BPQ9Y2Y0 163 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 LOC100509620A0A075B734 347 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 KLF18A0A0U1RQI7 1052 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 A0A0U1RQJ8 604 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 hDV102S1A0JD36 115 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 SH2B2O14492 632 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 NDC80O14777 642 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 PSMA7O14818 248 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 SMAD9O15198 467 aaKnown RBP4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 RGS16O15492 202 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 SPINT2O43291 252 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 PLRG1O43660 514 aaKnown RBP4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 CSPG5O95196 566 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 FGFR1OPO95684 399 aaKnown RBP4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 GLUD1P00367 558 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 CCNB1P14635 433 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 ZNF24P17028 368 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 MARCKSP29966 332 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 CDC25AP30304 524 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 BDKRB2P30411 391 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 ALDH1B1P30837 517 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 ARRB2P32121 409 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 MATR3P43243 847 aaKnown RBP eCLIP4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 GLUD2P49448 558 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 HSD17B4P51659 736 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 STAT2P52630 851 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 SEC61BP60468 96 aaKnown RBP4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 IRX4P78413 519 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 PHEXP78562 749 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 ECT2LQ008S8 904 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 FOXM1Q08050 763 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 CBX3Q13185 183 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 MAD2L1Q13257 205 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 ITGA9Q13797 1035 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 KCNC3Q14003 757 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 CYLC2Q14093 348 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 RCN2Q14257 317 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 HSP90AA4PQ58FG1 418 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 FAM133BQ5BKY9 247 aaKnown RBP4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 TCP11X2Q5H9J9 407 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 DCST1Q5T197 706 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 BEND3Q5T5X7 828 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 FAM69BQ5VUD6 431 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 GARNL3Q5VVW2 1013 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 TMEM198Q66K66 360 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 DUS1LQ6P1R4 473 aaKnown RBP4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 SLC36A4Q6YBV0 504 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 KBTBD6Q86V97 674 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 DNAAF5Q86Y56 855 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 CROCCP3Q8IVE0 287 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 LINC00346Q8IVM7 164 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 MAP7D3Q8IWC1 876 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 MYOCDQ8IZQ8 938 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 IQCKQ8N0W5 287 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 PELI3Q8N2H9 469 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 OR1J2Q8NGS2 313 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 NCOA7Q8NI08 942 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 LRRC8CQ8TDW0 803 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 FAM216AQ8WUB2 273 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 ASB5Q8WWX0 329 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 IRGQQ8WZA9 623 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 APBB2Q92870 758 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 ORAI1Q96D31 301 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 PGM2Q96G03 612 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 FIZ1Q96SL8 496 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 LRRC1Q9BTT6 524 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 POLR3CQ9BUI4 534 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 KIFC3Q9BVG8 833 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 MRPL1Q9BYD6 325 aaKnown RBP4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 TXLNGYQ9BZA5 131 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 TMEM39BQ9GZU3 492 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 DCLRE1BQ9H816 532 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 MAGEF1Q9HAY2 307 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 PAG1Q9NWQ8 432 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 ARHGEF38Q9NXL2 777 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 SPATA7Q9P0W8 599 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 MARCH4Q9P2E8 410 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 RNF7Q9UBF6 113 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 STK39Q9UEW8 545 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 MTRF1LQ9UGC7 380 aaKnown RBP4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 DDX25Q9UHL0 483 aaKnown RBP4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 STK38LQ9Y2H1 464 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 ZNF510Q9Y2H8 683 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 UTP11Q9Y3A2 253 aaKnown RBP4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 PTRH2Q9Y3E5 179 aaKnown RBP4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 L3MBTL1Q9Y468 752 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 BZW2Q9Y6E2 419 aaKnown RBP4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 USH1CQ9Y6N9 552 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 NID2Q14112 1375 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 201.3 ms