RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 PLAGL1Q9UM63 463 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 CORO2BQ9UQ03 480 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 PDE10AQ9Y233 779 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 COLEC10Q9Y6Z7 277 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 KIF13BQ9NQT8 1826 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 IGLON5A6NGN9 336 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 PEX11BO96011 259 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 RPS3P23396 243 aaKnown RBP eCLIP13.67□□□□□ -0.22
SCAF4-202ENST00000399804 TRAP1Q12931 704 aaKnown RBP13.67□□□□□ -0.22
SCAF4-202ENST00000399804 TCEAL5Q5H9L2 206 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 CTSL3PQ5NE16 218 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 SLC30A3Q99726 388 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 MUC13Q9H3R2 512 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 MAGEB17A8MXT2 336 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 SUV39H1O43463 412 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 GBAP04062 536 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 MYCLP1P12525 358 aaPredicted RBP13.67□□□□□ -0.22
SCAF4-202ENST00000399804 GM2AP17900 193 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 ZNF10P21506 573 aaPredicted RBP13.67□□□□□ -0.22
SCAF4-202ENST00000399804 SLC7A1P30825 629 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 PNLIPRP1P54315 467 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 ALDH6A1Q02252 535 aaKnown RBP13.67□□□□□ -0.22
SCAF4-202ENST00000399804 PWP1Q13610 501 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 NEDD8Q15843 81 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 TTC23Q5W5X9 447 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 LETMD1Q6P1Q0 360 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 VN1R3Q9BXE9 311 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 COQ10BQ9H8M1 238 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 RAPGEFL1Q9UHV5 662 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 BCAS2O75934 225 aaPredicted RBP13.66□□□□□ -0.22
SCAF4-202ENST00000399804 FGF4P08620 206 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 NR2F1P10589 423 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 CR2P20023 1033 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 TLX1P31314 330 aaPredicted RBP13.66□□□□□ -0.22
SCAF4-202ENST00000399804 MTHFRP42898 656 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 ZNF234Q14588 700 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 CCDC85BQ15834 202 aaPredicted RBP13.66□□□□□ -0.22
SCAF4-202ENST00000399804 HNRNPA1L2Q32P51 320 aaKnown RBP13.66□□□□□ -0.22
SCAF4-202ENST00000399804 LSMEM2Q8N112 164 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 OR9A1PQ8NGU1 263 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 CENPNQ96H22 339 aaPredicted RBP13.66□□□□□ -0.22
SCAF4-202ENST00000399804 OR51B5Q9H339 312 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 SUCOQ9UBS9 1254 aaKnown RBP13.66□□□□□ -0.22
SCAF4-202ENST00000399804 C3orf18Q9UK00 162 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 CDH7Q9ULB5 785 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 MAP4K5Q9Y4K4 846 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 AGRPO00253 132 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 ARPC2O15144 300 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 PENKP01210 267 aaPredicted RBP13.66□□□□□ -0.22
SCAF4-202ENST00000399804 ADRB3P13945 408 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 TIMP2P16035 220 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 ATP4BP51164 291 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 CASP9P55211 416 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 EEFSECP57772 596 aaKnown RBP13.66□□□□□ -0.22
SCAF4-202ENST00000399804 APLFQ8IW19 511 aaPredicted RBP13.66□□□□□ -0.22
SCAF4-202ENST00000399804 ZFP28Q8NHY6 868 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 HM13Q8TCT9 377 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 GORASP1Q9BQQ3 440 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 MCMBPQ9BTE3 642 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 DPEP2Q9H4A9 486 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 KLHL28Q9NXS3 571 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 ERN1O75460 977 aaKnown RBP13.66□□□□□ -0.22
SCAF4-202ENST00000399804 LINGO3P0C6S8 592 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 UMPSP11172 480 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 MAGEA12P43365 314 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 MEF2AQ02078 507 aaPredicted RBP13.66□□□□□ -0.22
SCAF4-202ENST00000399804 RHDQ02161 417 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 RGS1Q08116 209 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 FAM78AQ5JUQ0 283 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 TMEM214Q6NUQ4 689 aaKnown RBP13.66□□□□□ -0.22
SCAF4-202ENST00000399804 RTL10Q7L3V2 364 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 KRT73Q86Y46 540 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 GPR65Q8IYL9 337 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 OR9Q1Q8NGQ5 310 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 C3orf30Q96M34 536 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 AIG1Q9NVV5 245 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 INTS6Q9UL03 887 aaKnown RBP13.66□□□□□ -0.22
SCAF4-202ENST00000399804 RLFQ13129 1914 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 AQP12BA6NM10 295 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 CXCR6O00574 342 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 MID1O15344 667 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 TCTN1Q2MV58 587 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 AQP12AQ8IXF9 295 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 KIAA2013Q8IYS2 634 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 RAB7BQ96AH8 199 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 PKP2Q99959 881 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 MCOLN1Q9GZU1 580 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 TRIM39Q9HCM9 518 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 GDE1Q9NZC3 331 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 SELENONQ9NZV5 590 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 SAMD4AQ9UPU9 718 aaKnown RBP13.66□□□□□ -0.22
SCAF4-202ENST00000399804 ANGPT4Q9Y264 503 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 FADS3Q9Y5Q0 445 aa13.66□□□□□ -0.22
SCAF4-202ENST00000399804 RFXAPO00287 272 aa13.65□□□□□ -0.22
SCAF4-202ENST00000399804 RPS17P08708 135 aaKnown RBP13.65□□□□□ -0.22
SCAF4-202ENST00000399804 MPC1LP0DKB6 136 aa13.65□□□□□ -0.22
SCAF4-202ENST00000399804 CCR7P32248 378 aa13.65□□□□□ -0.22
SCAF4-202ENST00000399804 DPY19L1Q2PZI1 675 aa13.65□□□□□ -0.22
SCAF4-202ENST00000399804 PDCD4Q53EL6 469 aaKnown RBP13.65□□□□□ -0.22
SCAF4-202ENST00000399804 KANK2Q63ZY3 851 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms