RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 ADAP2Q9NPF8 381 aa12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 BHMG1C9JSJ3 638 aaPredicted RBP12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 NDUFS4O43181 175 aa12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 OAS1P00973 400 aaKnown RBP12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 HNRNPA1L2Q32P51 320 aaKnown RBP12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 EIF3MQ7L2H7 374 aaKnown RBP12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 VPS35Q96QK1 796 aa12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 MCCC1Q96RQ3 725 aaPredicted RBP12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 C8orf33Q9H7E9 229 aaPredicted RBP12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 H7BY64 318 aa12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 KLF11O14901 512 aa12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 LATO43561 262 aa12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 C5AR1P21730 350 aa12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 S100A5P33763 92 aa12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 RYKP34925 604 aa12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 MTX3Q5HYI7 312 aa12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 ZNF678Q5SXM1 525 aa12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 GLB1L3Q8NCI6 653 aaPredicted RBP12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 NCSTNQ92542 709 aa12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 WDR92Q96MX6 357 aa12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 PRAP1Q96NZ9 151 aa12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 IL17FQ96PD4 163 aa12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 DPYSL5Q9BPU6 564 aa12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 CADM1Q9BY67 442 aaKnown RBP12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 CD244Q9BZW8 370 aa12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 DENND2DQ9H6A0 471 aaPredicted RBP12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 SLC24A3Q9HC58 644 aa12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 C3orf18Q9UK00 162 aa12.79□□□□□ -0.36
PTPRN2-202ENST00000389416 ATXN2Q99700 1313 aaKnown RBP12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 FAM149AA5PLN7 773 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 B3GALT2O43825 422 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 CD1DP15813 335 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 POLR2CP19387 275 aaPredicted RBP12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 HOXD9P28356 352 aaPredicted RBP12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 ARF5P84085 180 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 GRIN2CQ14957 1233 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 UAP1L1Q3KQV9 507 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 RFTN2Q52LD8 501 aaPredicted RBP12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 CYS1Q717R9 158 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 NUDT13Q86X67 352 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 PROSER1Q86XN7 944 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 FAM20CQ8IXL6 584 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 SLC39A3Q9BRY0 314 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 CWH43Q9H720 699 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 TRIM39Q9HCM9 518 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 SPATA6Q9NWH7 488 aaPredicted RBP12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 GPR39O43194 453 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 FGF3P11487 239 aaPredicted RBP12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 ZNF155Q12901 538 aaPredicted RBP12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 TECRLQ5HYJ1 363 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 TANGO2Q6ICL3 276 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 TNFAIP8L2Q6P589 184 aaPredicted RBP12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 PQLC1Q8N2U9 271 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 SLC47A1Q96FL8 570 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 GAL3ST4Q96RP7 486 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 SLC17A9Q9BYT1 436 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 ZCCHC3Q9NUD5 404 aaKnown RBP12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 SCN2BO60939 215 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 ZNF605Q86T29 641 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 ADGRG2Q8IZP9 1017 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 PHTF2Q8N3S3 785 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 TTC29Q8NA56 475 aaPredicted RBP12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 BCL7CQ8WUZ0 217 aaPredicted RBP12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 JPH3Q8WXH2 748 aaPredicted RBP12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 ATP6V1HQ9UI12 483 aa12.78□□□□□ -0.36
PTPRN2-202ENST00000389416 ANKRD12Q6UB98 2062 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 MANBAO00462 879 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 RGS5O15539 181 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 CDH1P12830 882 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 PRPS1L1P21108 318 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 SEPHS1P49903 392 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 PGDP52209 483 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 NCF4Q15080 339 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 GCNT6Q5T4J0 391 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 TTC23Q5W5X9 447 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 FRMD7Q6ZUT3 714 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 PIANPQ8IYJ0 282 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 FBXO15Q8NCQ5 510 aaPredicted RBP12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 SLC5A11Q8WWX8 675 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 DNASE1L2Q92874 299 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 CIB1Q99828 191 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 EPB41L4BQ9H329 900 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 ANKHQ9HCJ1 492 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 HEBP1Q9NRV9 189 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 ACSL5Q9ULC5 683 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 SAMD4AQ9UPU9 718 aaKnown RBP12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 POLR1DQ9Y2S0 133 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 A0A1W2PRB8 838 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 B4GALT3O60512 393 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 MATN4O95460 622 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 PGFP49763 221 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 C1DQ13901 141 aaKnown RBP12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 LACTB2Q53H82 288 aaPredicted RBP12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 WDR45BQ5MNZ6 344 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 ARMC8Q8IUR7 673 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 ZBED6CLQ96FA7 236 aaPredicted RBP12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 POPDC3Q9HBV1 291 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 TRIOBPQ9H2D6 2365 aa12.77□□□□□ -0.36
PTPRN2-202ENST00000389416 FAM234BA2RU67 622 aa12.77□□□□□ -0.37
PTPRN2-202ENST00000389416 STX16-NPEPL1H3BU86 382 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms