RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 CHST15Q7LFX5 561 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 GOLGA7Q7Z5G4 137 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 COMMD9Q9P000 198 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 CLDN7O95471 211 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 PROZP22891 400 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 CLCN4P51793 760 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 ZNF252P-AS1Q0IIN9 211 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 IL18R1Q13478 541 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 PLEKHG6Q3KR16 790 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 RANBP3LQ86VV4 465 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 PEX5LQ8IYB4 626 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 GPR135Q8IZ08 494 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 OAS3Q9Y6K5 1087 aaKnown RBP16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 ITPKBP27987 946 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 C1QTNF8P60827 252 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 IQCCQ4KMZ1 466 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 RABL3Q5HYI8 236 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 TECRLQ5HYJ1 363 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 LRRC73Q5JTD7 316 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 OR4F3Q6IEY1 312 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 C14orf80Q86SX3 495 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 NUDT13Q86X67 352 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 SMG8Q8ND04 991 aaKnown RBP16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 FAM120CQ9NX05 1096 aaKnown RBP16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 TMEM9Q9P0T7 183 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 RPL36Q9Y3U8 105 aaKnown RBP16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 SETD1AO15047 1707 aaKnown RBP16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 MANBAO00462 879 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 CLDN4O14493 209 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 PGLSO95336 258 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 KLHL22Q53GT1 634 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 OGFOD2Q6N063 350 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 NAPRTQ6XQN6 538 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 ING5Q8WYH8 240 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 PIK3R3Q92569 461 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 BIRC7Q96CA5 298 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 FCRL4Q96PJ5 515 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 ZNF382Q96SR6 550 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 TUBA8Q9NY65 449 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 EURLQ9NYK6 297 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 FBXW2Q9UKT8 454 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 ARHGEF33A8MVX0 844 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 EFCAB9A8MZ26 197 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 ATP1B2P14415 290 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 KHKP50053 298 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 ALDH3A2P51648 485 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 SEMA3AQ14563 771 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 UPP1Q16831 310 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 PTCHD3Q3KNS1 767 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 TNFAIP8L2Q6P589 184 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 KLHDC10Q6PID8 442 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 KRT77Q7Z794 578 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 RIOK2Q9BVS4 552 aaKnown RBP16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 KCNN2Q9H2S1 579 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 NECTIN3Q9NQS3 549 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 SRRDQ9UH36 339 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 ERVK-21P61565 698 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 SOX4Q06945 474 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 CCNIQ14094 377 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 SCARB2Q14108 478 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 C1orf52Q8N6N3 182 aaKnown RBP16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 SCAIQ8N9R8 606 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 STON2Q8WXE9 905 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 C11orf24Q96F05 449 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 FZD4Q9ULV1 537 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 CFL2Q9Y281 166 aa16.7■□□□□ 0.26
TRAPPC11-201ENST00000334690 SLC35E2BP0CK96 405 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 FPR1P21462 350 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 SLC11A1P49279 550 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 CDH15P55291 814 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 MYBPC3Q14896 1274 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 NPTX1Q15818 432 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 DUOXA1Q1HG43 343 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 MYLK3Q32MK0 819 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 SPANXN4Q5MJ08 99 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 MAMDC4Q6UXC1 1216 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 SLC45A3Q96JT2 553 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 TRIM8Q9BZR9 551 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 ZDHHC4Q9NPG8 344 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 RPRD1BQ9NQG5 326 aaKnown RBP16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 ZNF222Q9UK12 451 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 RGPD2P0DJD1 1756 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 C9P02748 559 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 CD36P16671 472 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 FAUP35544 74 aaKnown RBP16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 ZFP69Q49AA0 526 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 LGI4Q8N135 537 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 PPP1R14BQ96C90 147 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 ADAMTS10Q9H324 1103 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 DNAAF2Q9NVR5 837 aaKnown RBP16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 DUXAA6NLW8 204 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 IGFBP4P22692 258 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 GHRHRQ02643 423 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 IL18Q14116 193 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 TYSND1Q2T9J0 566 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 C6orf136Q5SQH8 315 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 ZMIZ2Q8NF64 920 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 GEMIN6Q8WXD5 167 aaKnown RBP16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 TMCO6Q96DC7 493 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 PTPN18Q99952 460 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms