RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 OLIG2Q13516 323 aa18.81■□□□□ 0.6
LSM11-201ENST00000286307 MAPK14Q16539 360 aa18.81■□□□□ 0.6
LSM11-201ENST00000286307 TTC27Q6P3X3 843 aa18.81■□□□□ 0.6
LSM11-201ENST00000286307 MZT2AQ6P582 158 aa18.81■□□□□ 0.6
LSM11-201ENST00000286307 AMIGO2Q86SJ2 522 aa18.81■□□□□ 0.6
LSM11-201ENST00000286307 OR9A1PQ8NGU1 263 aa18.81■□□□□ 0.6
LSM11-201ENST00000286307 SLC38A4Q969I6 547 aa18.81■□□□□ 0.6
LSM11-201ENST00000286307 LENG8Q96PV6 779 aaPredicted RBP18.81■□□□□ 0.6
LSM11-201ENST00000286307 SH3GL2Q99962 352 aa18.81■□□□□ 0.6
LSM11-201ENST00000286307 OR1A2Q9Y585 309 aa18.81■□□□□ 0.6
LSM11-201ENST00000286307 RPS14P62263 151 aaKnown RBP18.81■□□□□ 0.6
LSM11-201ENST00000286307 MIEF2Q96C03 454 aa18.81■□□□□ 0.6
LSM11-201ENST00000286307 DUSP26Q9BV47 211 aa18.81■□□□□ 0.6
LSM11-201ENST00000286307 GSRP00390 522 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 HNRNPCP07910 306 aaKnown RBP eCLIP18.8■□□□□ 0.6
LSM11-201ENST00000286307 VWA5B1Q5TIE3 1220 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 TXNRD3NBQ6F5E7 133 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 OR2T3Q8NH03 318 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 IGSF8Q969P0 613 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 TFB2MQ9H5Q4 396 aaKnown RBP18.8■□□□□ 0.6
LSM11-201ENST00000286307 COQ9O75208 318 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 APBB3O95704 486 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 CBSLP0DN79 551 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 CBSP35520 551 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 ARFIP1P53367 373 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 RASSF6Q6ZTQ3 369 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 APCDD1Q8J025 514 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 SETD6Q8TBK2 473 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 CASD1Q96PB1 797 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 LINC00597Q9H2U6 94 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 PSMD9O00233 223 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 TSC22D2O75157 780 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 RASGEF1AQ8N9B8 481 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 DCAKDQ8WVC6 231 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 EZH1Q92800 747 aaPredicted RBP18.8■□□□□ 0.6
LSM11-201ENST00000286307 DCBLD2Q96PD2 775 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 SPEF2Q9C093 1822 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 PNMA8CA0A1B0GUJ8 204 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 SERPINA1P01009 418 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 GLYATQ6IB77 296 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 C12orf40Q86WS4 652 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 OR10Q1Q8NGQ4 319 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 ZCCHC3Q9NUD5 404 aaKnown RBP18.8■□□□□ 0.6
LSM11-201ENST00000286307 MYH13Q9UKX3 1938 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 ZNF860A6NHJ4 632 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 CDC40O60508 579 aaKnown RBP eCLIP18.8■□□□□ 0.6
LSM11-201ENST00000286307 CHRNGP07510 517 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 CDH1P12830 882 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 GRIA1P42261 906 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 MRPS35P82673 323 aaKnown RBP18.8■□□□□ 0.6
LSM11-201ENST00000286307 TCEAL6Q6IPX3 200 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 CXXC5Q7LFL8 322 aaKnown RBP18.8■□□□□ 0.6
LSM11-201ENST00000286307 PDP1Q9P0J1 537 aaPredicted RBP18.8■□□□□ 0.6
LSM11-201ENST00000286307 VPS29Q9UBQ0 182 aa18.8■□□□□ 0.6
LSM11-201ENST00000286307 ELOVL7A1L3X0 281 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 ECI2O75521 394 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 KHDRBS3O75525 346 aaKnown RBP18.79■□□□□ 0.6
LSM11-201ENST00000286307 FABP3P05413 133 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 DNASE1L1P49184 302 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 FRRS1Q6ZNA5 592 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 TTC9BQ8N6N2 239 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 ZDHHC1Q8WTX9 485 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 HOPXQ9BPY8 73 aaPredicted RBP18.79■□□□□ 0.6
LSM11-201ENST00000286307 SLC35C2Q9NQQ7 365 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 PDP2Q9P2J9 529 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 SLCO3A1Q9UIG8 710 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 PHF11Q9UIL8 331 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 TRIM16LQ309B1 348 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 TRMT10BQ6PF06 316 aaKnown RBP18.79■□□□□ 0.6
LSM11-201ENST00000286307 OR5AK3PQ8NH89 298 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 SLC5A11Q8WWX8 675 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 EFHD2Q96C19 240 aaPredicted RBP18.79■□□□□ 0.6
LSM11-201ENST00000286307 ITGB1P05556 798 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 DECR1Q16698 335 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 HPS6Q86YV9 775 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 NPY6RQ99463 290 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 SLC2A11Q9BYW1 496 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 TNFRSF11BO00300 401 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 CYB5AP00167 134 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 PTX3P26022 381 aaPredicted RBP18.79■□□□□ 0.6
LSM11-201ENST00000286307 ZNF41P51814 821 aaPredicted RBP18.79■□□□□ 0.6
LSM11-201ENST00000286307 FAM214AQ32MH5 1076 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 ZNF783Q6ZMS7 281 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 IQCHQ86VS3 1027 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 PARP8Q8N3A8 854 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 PSMD11O00231 422 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 JUNP05412 331 aaKnown RBP18.79■□□□□ 0.6
LSM11-201ENST00000286307 CTSKP43235 329 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 ZNF761Q86XN6 746 aaPredicted RBP18.79■□□□□ 0.6
LSM11-201ENST00000286307 SPPL2CQ8IUH8 684 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 RASSF5Q8WWW0 418 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 USP29Q9HBJ7 922 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 CHMP1AQ9HD42 196 aaPredicted RBP18.79■□□□□ 0.6
LSM11-201ENST00000286307 HEBP1Q9NRV9 189 aa18.79■□□□□ 0.6
LSM11-201ENST00000286307 TULP3O75386 442 aa18.78■□□□□ 0.6
LSM11-201ENST00000286307 EIF4HQ15056 248 aaKnown RBP18.78■□□□□ 0.6
LSM11-201ENST00000286307 SNX33Q8WV41 574 aa18.78■□□□□ 0.6
LSM11-201ENST00000286307 RASSF1Q9NS23 344 aa18.78■□□□□ 0.6
LSM11-201ENST00000286307 OAS1P00973 400 aaKnown RBP18.78■□□□□ 0.6
LSM11-201ENST00000286307 TSPAN14Q8NG11 270 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms