RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 PCDH11YQ9BZA8 1340 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 TEX13DA0A0J9YY54 714 aaPredicted RBP4.82□□□□□ -1.64
LINC00397-202ENST00000606785 KBTBD13C9JR72 458 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 SOCS2O14508 198 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 CTDSPLO15194 276 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 VEGFDO43915 354 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 WDR1O75083 606 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 NME6O75414 186 aaPredicted RBP4.82□□□□□ -1.64
LINC00397-202ENST00000606785 CRCPO75575 148 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 B3GALNT1O75752 331 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 BCAS2O75934 225 aaPredicted RBP4.82□□□□□ -1.64
LINC00397-202ENST00000606785 GSRP00390 522 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 KRT19P08727 400 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 LINC00271P0C7V0 271 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 PCP11498 1178 aaKnown RBP4.82□□□□□ -1.64
LINC00397-202ENST00000606785 TYMPP19971 482 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 GNL1P36915 607 aaPredicted RBP4.82□□□□□ -1.64
LINC00397-202ENST00000606785 USP8P40818 1118 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 CDX1P47902 265 aaPredicted RBP4.82□□□□□ -1.64
LINC00397-202ENST00000606785 KCNJ4P48050 445 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 CLDN15P56746 228 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 ISL1P61371 349 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 FOLH1Q04609 750 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 EEF1A2Q05639 463 aaKnown RBP4.82□□□□□ -1.64
LINC00397-202ENST00000606785 TRAF3Q13114 568 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 ZKSCAN8Q15776 578 aaPredicted RBP4.82□□□□□ -1.64
LINC00397-202ENST00000606785 PTGISQ16647 500 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 ELFN2Q5R3F8 820 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 NDUFAF5Q5TEU4 345 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 ETFRF1Q6IPR1 90 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 PODNL1Q6PEZ8 512 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 CATSPER4Q7RTX7 472 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 TECPR1Q7Z6L1 1165 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 CFAP206Q8IYR0 622 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 RBMXL3Q8N7X1 1067 aaKnown RBP4.82□□□□□ -1.64
LINC00397-202ENST00000606785 BMPERQ8N8U9 685 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 NRACQ8N912 160 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 FIG4Q92562 907 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 RPL36ALQ969Q0 106 aaKnown RBP4.82□□□□□ -1.64
LINC00397-202ENST00000606785 C5orf30Q96GV9 206 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 TMEM19Q96HH6 336 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 OXNAD1Q96HP4 312 aaPredicted RBP4.82□□□□□ -1.64
LINC00397-202ENST00000606785 PRAM1Q96QH2 718 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 GAL3ST4Q96RP7 486 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 PKP4Q99569 1192 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 NEURL2Q9BR09 285 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 FSD1Q9BTV5 496 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 SLC2A11Q9BYW1 496 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 OSBPL8Q9BZF1 889 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 TRIM7Q9C029 511 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 XPO4Q9C0E2 1151 aaKnown RBP4.82□□□□□ -1.64
LINC00397-202ENST00000606785 SNX25Q9H3E2 840 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 AKIRIN1Q9H9L7 192 aaPredicted RBP4.82□□□□□ -1.64
LINC00397-202ENST00000606785 RNPEPL1Q9HAU8 725 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 GKN1Q9NS71 199 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 RAI14Q9P0K7 980 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 GPR132Q9UNW8 380 aa4.82□□□□□ -1.64
LINC00397-202ENST00000606785 A0A0A6YYC8 382 aaPredicted RBP4.81□□□□□ -1.64
LINC00397-202ENST00000606785 TRAV24A0A0B4J272 114 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 MAGEA13PA6NCF6 341 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 KRT87PA6NCN2 255 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 CCDC69A6NI79 296 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 I3L1I5 382 aaPredicted RBP4.81□□□□□ -1.64
LINC00397-202ENST00000606785 PRAF2O60831 178 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 LDB3O75112 727 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 ATP6AP2O75787 350 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 DDHD2O94830 711 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 GLUD1P00367 558 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 LIPFP07098 398 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 ACP2P11117 423 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 EPORP19235 508 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 MAPK3P27361 379 aaPredicted RBP4.81□□□□□ -1.64
LINC00397-202ENST00000606785 CD86P42081 329 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 GLUD2P49448 558 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 PEX5P50542 639 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 INHBEP58166 350 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 EEF1A1P68104 462 aaKnown RBP4.81□□□□□ -1.64
LINC00397-202ENST00000606785 MAP2K1Q02750 393 aaPredicted RBP4.81□□□□□ -1.64
LINC00397-202ENST00000606785 EGR4Q05215 589 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 GTF2H2Q13888 395 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 CA9Q16790 459 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 EEF1A1P5Q5VTE0 462 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 OR7E24Q6IFN5 339 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 GTF2H2CQ6P1K8 395 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 RHBDF2Q6PJF5 856 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 GFRALQ6UXV0 394 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 ASB18Q6ZVZ8 466 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 NUDT13Q86X67 352 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 TMEM219Q86XT9 240 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 ADHFE1Q8IWW8 467 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 ODF3L1Q8IXM7 274 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 SRRM1Q8IYB3 904 aaKnown RBP4.81□□□□□ -1.64
LINC00397-202ENST00000606785 TEX9Q8N6V9 391 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 RASGEF1AQ8N9B8 481 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 ZNF114Q8NC26 417 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 NPEPL1Q8NDH3 523 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 OR13J1Q8NGT2 312 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 RUNDC3BQ96NL0 473 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 ATG101Q9BSB4 218 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 SF3B5Q9BWJ5 86 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms