RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 EBNA1BP2Q99848 306 aaKnown RBP21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 ARHGAP9Q9BRR9 750 aa21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 PLAC1Q9HBJ0 212 aa21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 FBXO5Q9UKT4 447 aa21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 COL6A6A6NMZ7 2263 aa21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 TP73O15350 636 aa21.52■■□□□ 1.04
GTF2F1-204ENST00000594965 TTI1O43156 1089 aa21.52■■□□□ 1.04
GTF2F1-204ENST00000594965 KATNA1O75449 491 aa21.52■■□□□ 1.04
GTF2F1-204ENST00000594965 HAUS5O94927 633 aa21.52■■□□□ 1.04
GTF2F1-204ENST00000594965 CTSBP07858 339 aa21.52■■□□□ 1.04
GTF2F1-204ENST00000594965 FURINP09958 794 aa21.52■■□□□ 1.04
GTF2F1-204ENST00000594965 RORAP35398 523 aa21.52■■□□□ 1.04
GTF2F1-204ENST00000594965 MC1RQ01726 317 aa21.52■■□□□ 1.04
GTF2F1-204ENST00000594965 DEFB110Q30KQ9 67 aa21.52■■□□□ 1.04
GTF2F1-204ENST00000594965 HSP90AA5PQ58FG0 334 aa21.52■■□□□ 1.04
GTF2F1-204ENST00000594965 C16orf46Q6P387 395 aa21.52■■□□□ 1.04
GTF2F1-204ENST00000594965 BORAQ6PGQ7 559 aa21.52■■□□□ 1.04
GTF2F1-204ENST00000594965 KCNMB4Q86W47 210 aa21.52■■□□□ 1.04
GTF2F1-204ENST00000594965 DSELQ8IZU8 1212 aa21.52■■□□□ 1.04
GTF2F1-204ENST00000594965 DENND1AQ8TEH3 1009 aa21.52■■□□□ 1.04
GTF2F1-204ENST00000594965 SKA2Q8WVK7 121 aaPredicted RBP21.52■■□□□ 1.04
GTF2F1-204ENST00000594965 RUNDC3BQ96NL0 473 aa21.52■■□□□ 1.04
GTF2F1-204ENST00000594965 CATSPER2Q96P56 530 aa21.52■■□□□ 1.04
GTF2F1-204ENST00000594965 IARS2Q9NSE4 1012 aaKnown RBP21.52■■□□□ 1.04
GTF2F1-204ENST00000594965 KCND3Q9UK17 655 aa21.52■■□□□ 1.04
GTF2F1-204ENST00000594965 SLC39A10Q9ULF5 831 aa21.52■■□□□ 1.04
GTF2F1-204ENST00000594965 MAP3K7O43318 606 aa21.51■■□□□ 1.03
GTF2F1-204ENST00000594965 PAFAH1B1P43034 410 aa21.51■■□□□ 1.03
GTF2F1-204ENST00000594965 MORF4L2Q15014 288 aa21.51■■□□□ 1.03
GTF2F1-204ENST00000594965 KLHL38Q2WGJ6 581 aa21.51■■□□□ 1.03
GTF2F1-204ENST00000594965 BBS9Q3SYG4 887 aa21.51■■□□□ 1.03
GTF2F1-204ENST00000594965 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.51■■□□□ 1.03
GTF2F1-204ENST00000594965 HIBCHQ6NVY1 386 aaPredicted RBP21.51■■□□□ 1.03
GTF2F1-204ENST00000594965 DNAJC22Q8N4W6 341 aa21.51■■□□□ 1.03
GTF2F1-204ENST00000594965 CALML6Q8TD86 181 aa21.51■■□□□ 1.03
GTF2F1-204ENST00000594965 WDR83Q9BRX9 315 aaKnown RBP21.51■■□□□ 1.03
GTF2F1-204ENST00000594965 PCMTD2Q9NV79 361 aa21.51■■□□□ 1.03
GTF2F1-204ENST00000594965 RNF14Q9UBS8 474 aa21.51■■□□□ 1.03
GTF2F1-204ENST00000594965 SERTAD3Q9UJW9 196 aa21.51■■□□□ 1.03
GTF2F1-204ENST00000594965 KLHL20Q9Y2M5 609 aa21.51■■□□□ 1.03
GTF2F1-204ENST00000594965 SEC16AO15027 2179 aa21.51■■□□□ 1.03
GTF2F1-204ENST00000594965 C21orf140B9A014 251 aa21.5■■□□□ 1.03
GTF2F1-204ENST00000594965 E5RI56 91 aa21.5■■□□□ 1.03
GTF2F1-204ENST00000594965 MEN1O00255 615 aa21.5■■□□□ 1.03
GTF2F1-204ENST00000594965 CREG1O75629 220 aa21.5■■□□□ 1.03
GTF2F1-204ENST00000594965 ERVK-10P10266 1014 aa21.5■■□□□ 1.03
GTF2F1-204ENST00000594965 MAGP20916 626 aa21.5■■□□□ 1.03
GTF2F1-204ENST00000594965 CCNFP41002 786 aa21.5■■□□□ 1.03
GTF2F1-204ENST00000594965 ITGA1P56199 1179 aa21.5■■□□□ 1.03
GTF2F1-204ENST00000594965 ERV3-1Q14264 604 aa21.5■■□□□ 1.03
GTF2F1-204ENST00000594965 SPANXN3Q5MJ09 141 aa21.5■■□□□ 1.03
GTF2F1-204ENST00000594965 TTC23LQ6PF05 361 aa21.5■■□□□ 1.03
GTF2F1-204ENST00000594965 C2CD4AQ8NCU7 369 aaPredicted RBP21.5■■□□□ 1.03
GTF2F1-204ENST00000594965 HMGCLL1Q8TB92 370 aa21.5■■□□□ 1.03
GTF2F1-204ENST00000594965 MR1Q95460 341 aa21.5■■□□□ 1.03
GTF2F1-204ENST00000594965 FOPNLQ96NB1 174 aa21.5■■□□□ 1.03
GTF2F1-204ENST00000594965 FAM167BQ9BTA0 163 aa21.5■■□□□ 1.03
GTF2F1-204ENST00000594965 RAB11FIP5Q9BXF6 653 aa21.5■■□□□ 1.03
GTF2F1-204ENST00000594965 SPRTNQ9H040 489 aaPredicted RBP21.5■■□□□ 1.03
GTF2F1-204ENST00000594965 CHST8Q9H2A9 424 aa21.5■■□□□ 1.03
GTF2F1-204ENST00000594965 ACTR5Q9H9F9 607 aaPredicted RBP21.5■■□□□ 1.03
GTF2F1-204ENST00000594965 MRFAP1Q9Y605 127 aa21.5■■□□□ 1.03
GTF2F1-204ENST00000594965 A0A1W2PPV9 198 aa21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 ARHGEF33A8MVX0 844 aa21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 E7EQ34 232 aa21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 ZNF749O43361 778 aa21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 PSIP1O75475 530 aaKnown RBP21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 TTC4O95801 387 aa21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 CYP2A7P20853 494 aa21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 GABRB3P28472 473 aa21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 ELK3P41970 407 aa21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 ITGA8P53708 1063 aa21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 RPS18P62269 152 aaKnown RBP21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 CUL1Q13616 776 aa21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 DEFB109BQ30KR1 87 aa21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 HP1BP3Q5SSJ5 553 aaPredicted RBP21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 ZNF385CQ66K41 422 aaPredicted RBP21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 FCRL6Q6DN72 434 aa21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 KCNJ9Q92806 393 aa21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 CLIP3Q96DZ5 547 aa21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 KRT12Q99456 494 aa21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 AARSD1Q9BTE6 412 aaKnown RBP21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 GPR87Q9BY21 358 aa21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 ACTL8Q9H568 366 aa21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 KLHL42Q9P2K6 505 aa21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 DHRS7Q9Y394 339 aa21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 HEATR5BQ9P2D3 2071 aa21.49■■□□□ 1.03
GTF2F1-204ENST00000594965 SEC31AO94979 1220 aaKnown RBP21.48■■□□□ 1.03
GTF2F1-204ENST00000594965 RECKO95980 971 aa21.48■■□□□ 1.03
GTF2F1-204ENST00000594965 KLK3P07288 261 aaPredicted RBP21.48■■□□□ 1.03
GTF2F1-204ENST00000594965 CAPN1P07384 714 aa21.48■■□□□ 1.03
GTF2F1-204ENST00000594965 PSMB5P28074 263 aa21.48■■□□□ 1.03
GTF2F1-204ENST00000594965 PTPN4P29074 926 aa21.48■■□□□ 1.03
GTF2F1-204ENST00000594965 CCR10P46092 362 aa21.48■■□□□ 1.03
GTF2F1-204ENST00000594965 POLE2P56282 527 aa21.48■■□□□ 1.03
GTF2F1-204ENST00000594965 TIAL1Q01085 375 aaKnown RBP eCLIP21.48■■□□□ 1.03
GTF2F1-204ENST00000594965 FASTKQ14296 549 aaKnown RBP21.48■■□□□ 1.03
GTF2F1-204ENST00000594965 CYP2A13Q16696 494 aa21.48■■□□□ 1.03
GTF2F1-204ENST00000594965 CYHR1Q6ZMK1 362 aa21.48■■□□□ 1.03
GTF2F1-204ENST00000594965 NEK10Q6ZWH5 1172 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms