RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 OR52E1Q8NGJ3 308 aa16.96■□□□□ 0.31
SHKBP1-203ENST00000594298 PNPLA2Q96AD5 504 aa16.96■□□□□ 0.31
SHKBP1-203ENST00000594298 SERPINB12Q96P63 405 aa16.96■□□□□ 0.31
SHKBP1-203ENST00000594298 TRAPPC9Q96Q05 1148 aa16.96■□□□□ 0.31
SHKBP1-203ENST00000594298 TSSK1BQ9BXA7 367 aa16.96■□□□□ 0.31
SHKBP1-203ENST00000594298 MVB12BQ9H7P6 319 aa16.96■□□□□ 0.31
SHKBP1-203ENST00000594298 GPR83Q9NYM4 423 aa16.96■□□□□ 0.31
SHKBP1-203ENST00000594298 PADI2Q9Y2J8 665 aa16.96■□□□□ 0.31
SHKBP1-203ENST00000594298 C2orf74A8MZ97 194 aa16.95■□□□□ 0.3
SHKBP1-203ENST00000594298 TCP11X1B4DZS4 312 aa16.95■□□□□ 0.3
SHKBP1-203ENST00000594298 GOLGA8MH3BSY2 632 aa16.95■□□□□ 0.3
SHKBP1-203ENST00000594298 CD3EAPO15446 510 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-203ENST00000594298 AVILO75366 819 aa16.95■□□□□ 0.3
SHKBP1-203ENST00000594298 FTH1P02794 183 aa16.95■□□□□ 0.3
SHKBP1-203ENST00000594298 TUBB4AP04350 444 aa16.95■□□□□ 0.3
SHKBP1-203ENST00000594298 PRSS56P0CW18 603 aa16.95■□□□□ 0.3
SHKBP1-203ENST00000594298 AGXTP21549 392 aa16.95■□□□□ 0.3
SHKBP1-203ENST00000594298 NMBRP28336 390 aa16.95■□□□□ 0.3
SHKBP1-203ENST00000594298 PTCHD3Q3KNS1 767 aa16.95■□□□□ 0.3
SHKBP1-203ENST00000594298 RNASEH2BQ5TBB1 312 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-203ENST00000594298 FAM69BQ5VUD6 431 aa16.95■□□□□ 0.3
SHKBP1-203ENST00000594298 SLC6A19Q695T7 634 aa16.95■□□□□ 0.3
SHKBP1-203ENST00000594298 MRNIPQ6NTE8 343 aa16.95■□□□□ 0.3
SHKBP1-203ENST00000594298 ADGRF3Q8IZF5 1079 aa16.95■□□□□ 0.3
SHKBP1-203ENST00000594298 RBMXL3Q8N7X1 1067 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-203ENST00000594298 SLC7A5P2Q9GIP4 190 aa16.95■□□□□ 0.3
SHKBP1-203ENST00000594298 SLAMF7Q9NQ25 335 aa16.95■□□□□ 0.3
SHKBP1-203ENST00000594298 ACTR10Q9NZ32 417 aa16.95■□□□□ 0.3
SHKBP1-203ENST00000594298 C5AR2Q9P296 337 aa16.95■□□□□ 0.3
SHKBP1-203ENST00000594298 FAM237BA0A1B0GVD1 139 aa16.94■□□□□ 0.3
SHKBP1-203ENST00000594298 C9J4A7 227 aa16.94■□□□□ 0.3
SHKBP1-203ENST00000594298 FANCGO15287 622 aa16.94■□□□□ 0.3
SHKBP1-203ENST00000594298 ZNF749O43361 778 aa16.94■□□□□ 0.3
SHKBP1-203ENST00000594298 DDAH2O95865 285 aa16.94■□□□□ 0.3
SHKBP1-203ENST00000594298 PLOD1Q02809 727 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-203ENST00000594298 BOP1Q14137 746 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-203ENST00000594298 KCTD19Q17RG1 926 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-203ENST00000594298 PRR30Q53SZ7 412 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-203ENST00000594298 DNAJC21Q5F1R6 531 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-203ENST00000594298 HIST2H2BCQ6DN03 193 aa16.94■□□□□ 0.3
SHKBP1-203ENST00000594298 KIAA0930Q6ICG6 404 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-203ENST00000594298 CDHR3Q6ZTQ4 885 aa16.94■□□□□ 0.3
SHKBP1-203ENST00000594298 MAATS1Q7Z4T9 603 aa16.94■□□□□ 0.3
SHKBP1-203ENST00000594298 RAB43Q86YS6 212 aa16.94■□□□□ 0.3
SHKBP1-203ENST00000594298 CLDN19Q8N6F1 224 aa16.94■□□□□ 0.3
SHKBP1-203ENST00000594298 OTUD6BQ8N6M0 293 aa16.94■□□□□ 0.3
SHKBP1-203ENST00000594298 TFGQ92734 400 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-203ENST00000594298 IP6K3Q96PC2 410 aa16.94■□□□□ 0.3
SHKBP1-203ENST00000594298 KRT12Q99456 494 aa16.94■□□□□ 0.3
SHKBP1-203ENST00000594298 C17orf62Q9BQA9 187 aa16.94■□□□□ 0.3
SHKBP1-203ENST00000594298 SLC29A3Q9BZD2 475 aa16.94■□□□□ 0.3
SHKBP1-203ENST00000594298 CHRNA10Q9GZZ6 450 aa16.94■□□□□ 0.3
SHKBP1-203ENST00000594298 TNRC6AQ8NDV7 1962 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-203ENST00000594298 A6NL46 340 aa16.93■□□□□ 0.3
SHKBP1-203ENST00000594298 H3BMH7 237 aa16.93■□□□□ 0.3
SHKBP1-203ENST00000594298 NDUFS3O75489 264 aa16.93■□□□□ 0.3
SHKBP1-203ENST00000594298 KLF7O75840 302 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-203ENST00000594298 VAPBO95292 243 aa16.93■□□□□ 0.3
SHKBP1-203ENST00000594298 RNF224P0DH78 156 aa16.93■□□□□ 0.3
SHKBP1-203ENST00000594298 PVRP15151 417 aa16.93■□□□□ 0.3
SHKBP1-203ENST00000594298 PDHA2P29803 388 aa16.93■□□□□ 0.3
SHKBP1-203ENST00000594298 ATP1A4Q13733 1029 aa16.93■□□□□ 0.3
SHKBP1-203ENST00000594298 MORF4L2Q15014 288 aa16.93■□□□□ 0.3
SHKBP1-203ENST00000594298 VWA5B1Q5TIE3 1220 aa16.93■□□□□ 0.3
SHKBP1-203ENST00000594298 SPESP1Q6UW49 350 aa16.93■□□□□ 0.3
SHKBP1-203ENST00000594298 GPR135Q8IZ08 494 aa16.93■□□□□ 0.3
SHKBP1-203ENST00000594298 PHC3Q8NDX5 983 aa16.93■□□□□ 0.3
SHKBP1-203ENST00000594298 SPATA4Q8NEY3 305 aa16.93■□□□□ 0.3
SHKBP1-203ENST00000594298 MFSD3Q96ES6 412 aa16.93■□□□□ 0.3
SHKBP1-203ENST00000594298 TCF12Q99081 682 aa16.93■□□□□ 0.3
SHKBP1-203ENST00000594298 NRTNQ99748 197 aa16.93■□□□□ 0.3
SHKBP1-203ENST00000594298 MFRPQ9BY79 579 aa16.93■□□□□ 0.3
SHKBP1-203ENST00000594298 LUZP4Q9P127 313 aa16.93■□□□□ 0.3
SHKBP1-203ENST00000594298 MAD1L1Q9Y6D9 718 aa16.93■□□□□ 0.3
SHKBP1-203ENST00000594298 AP1M2Q9Y6Q5 423 aa16.93■□□□□ 0.3
SHKBP1-203ENST00000594298 FAM187AA6NFU0 413 aa16.92■□□□□ 0.3
SHKBP1-203ENST00000594298 KIF2AO00139 706 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-203ENST00000594298 LIN7AO14910 233 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-203ENST00000594298 TTI1O43156 1089 aa16.92■□□□□ 0.3
SHKBP1-203ENST00000594298 MAGEA3P43357 314 aa16.92■□□□□ 0.3
SHKBP1-203ENST00000594298 CKAP4Q07065 602 aaKnown RBP16.92■□□□□ 0.3
SHKBP1-203ENST00000594298 THOC5Q13769 683 aaKnown RBP16.92■□□□□ 0.3
SHKBP1-203ENST00000594298 SSPNQ14714 243 aa16.92■□□□□ 0.3
SHKBP1-203ENST00000594298 RNF187Q5TA31 235 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-203ENST00000594298 CES3Q6UWW8 571 aa16.92■□□□□ 0.3
SHKBP1-203ENST00000594298 LRRC6Q86X45 466 aa16.92■□□□□ 0.3
SHKBP1-203ENST00000594298 BBOF1Q8ND07 529 aa16.92■□□□□ 0.3
SHKBP1-203ENST00000594298 GABPB2Q8TAK5 448 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-203ENST00000594298 ELMO1Q92556 727 aa16.92■□□□□ 0.3
SHKBP1-203ENST00000594298 TCTN2Q96GX1 697 aa16.92■□□□□ 0.3
SHKBP1-203ENST00000594298 SNF8Q96H20 258 aa16.92■□□□□ 0.3
SHKBP1-203ENST00000594298 FER1L6-AS2Q96M78 137 aa16.92■□□□□ 0.3
SHKBP1-203ENST00000594298 C16orf45Q96MC5 204 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-203ENST00000594298 NAT9Q9BTE0 207 aa16.92■□□□□ 0.3
SHKBP1-203ENST00000594298 HGH1Q9BTY7 390 aa16.92■□□□□ 0.3
SHKBP1-203ENST00000594298 KLHL25Q9H0H3 589 aa16.92■□□□□ 0.3
SHKBP1-203ENST00000594298 XKR8Q9H6D3 395 aa16.92■□□□□ 0.3
SHKBP1-203ENST00000594298 ICKQ9UPZ9 632 aa16.92■□□□□ 0.3
SHKBP1-203ENST00000594298 VPS9D1Q9Y2B5 631 aa16.92■□□□□ 0.3
SHKBP1-203ENST00000594298 EFCAB8A8MWE9 144 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms