RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 WISP1O95388 367 aa15.2■□□□□ 0.02
USB1-208ENST00000563207 FOLR1P15328 257 aa15.2■□□□□ 0.02
USB1-208ENST00000563207 NDUFS1P28331 727 aa15.2■□□□□ 0.02
USB1-208ENST00000563207 GABRB3P28472 473 aa15.2■□□□□ 0.02
USB1-208ENST00000563207 CCR7P32248 378 aa15.2■□□□□ 0.02
USB1-208ENST00000563207 CSE1LP55060 971 aaKnown RBP15.2■□□□□ 0.02
USB1-208ENST00000563207 ABHD18Q0P651 414 aa15.2■□□□□ 0.02
USB1-208ENST00000563207 CDC20Q12834 499 aa15.2■□□□□ 0.02
USB1-208ENST00000563207 KCNAB2Q13303 367 aa15.2■□□□□ 0.02
USB1-208ENST00000563207 TTLL9Q3SXZ7 439 aa15.2■□□□□ 0.02
USB1-208ENST00000563207 STRA8Q7Z7C7 330 aa15.2■□□□□ 0.02
USB1-208ENST00000563207 CNPY4Q8N129 248 aa15.2■□□□□ 0.02
USB1-208ENST00000563207 FBF1Q8TES7 1133 aa15.2■□□□□ 0.02
USB1-208ENST00000563207 STARD8Q92502 1023 aa15.2■□□□□ 0.02
USB1-208ENST00000563207 CYTH2Q99418 400 aa15.2■□□□□ 0.02
USB1-208ENST00000563207 ZPBPQ9BS86 351 aa15.2■□□□□ 0.02
USB1-208ENST00000563207 OR52A5Q9H2C5 316 aa15.2■□□□□ 0.02
USB1-208ENST00000563207 ZNF71Q9NQZ8 489 aaPredicted RBP15.2■□□□□ 0.02
USB1-208ENST00000563207 IMP3Q9NV31 184 aaKnown RBP15.2■□□□□ 0.02
USB1-208ENST00000563207 TAS2R13Q9NYV9 303 aa15.2■□□□□ 0.02
USB1-208ENST00000563207 CROTQ9UKG9 612 aa15.2■□□□□ 0.02
USB1-208ENST00000563207 COLEC10Q9Y6Z7 277 aa15.2■□□□□ 0.02
USB1-208ENST00000563207 TLN1Q9Y490 2541 aaKnown RBP15.2■□□□□ 0.02
USB1-208ENST00000563207 IQCF5A8MTL0 148 aa15.19■□□□□ 0.02
USB1-208ENST00000563207 EIF3FO00303 357 aaPredicted RBP15.19■□□□□ 0.02
USB1-208ENST00000563207 VPS26AO75436 327 aa15.19■□□□□ 0.02
USB1-208ENST00000563207 C1QAP02745 245 aa15.19■□□□□ 0.02
USB1-208ENST00000563207 ABHD2P08910 425 aa15.19■□□□□ 0.02
USB1-208ENST00000563207 NELFEP18615 380 aaKnown RBP15.19■□□□□ 0.02
USB1-208ENST00000563207 ATP5DP30049 168 aa15.19■□□□□ 0.02
USB1-208ENST00000563207 DLSTP36957 453 aa15.19■□□□□ 0.02
USB1-208ENST00000563207 GP5P40197 560 aa15.19■□□□□ 0.02
USB1-208ENST00000563207 CCR10P46092 362 aa15.19■□□□□ 0.02
USB1-208ENST00000563207 PMS2P54278 862 aa15.19■□□□□ 0.02
USB1-208ENST00000563207 KCNC4Q03721 635 aa15.19■□□□□ 0.02
USB1-208ENST00000563207 HSPA14Q0VDF9 509 aa15.19■□□□□ 0.02
USB1-208ENST00000563207 BOP1Q14137 746 aaKnown RBP15.19■□□□□ 0.02
USB1-208ENST00000563207 KBTBD12Q3ZCT8 623 aa15.19■□□□□ 0.02
USB1-208ENST00000563207 ZNF549Q6P9A3 640 aa15.19■□□□□ 0.02
USB1-208ENST00000563207 C6orf15Q6UXA7 325 aaPredicted RBP15.19■□□□□ 0.02
USB1-208ENST00000563207 PRSS42Q7Z5A4 293 aa15.19■□□□□ 0.02
USB1-208ENST00000563207 ZC3HC1Q86WB0 502 aaKnown RBP15.19■□□□□ 0.02
USB1-208ENST00000563207 RASGRP3Q8IV61 690 aa15.19■□□□□ 0.02
USB1-208ENST00000563207 SLC22A15Q8IZD6 547 aa15.19■□□□□ 0.02
USB1-208ENST00000563207 MAP3K3Q99759 626 aa15.19■□□□□ 0.02
USB1-208ENST00000563207 RHOJQ9H4E5 214 aa15.19■□□□□ 0.02
USB1-208ENST00000563207 CLMPQ9H6B4 373 aa15.19■□□□□ 0.02
USB1-208ENST00000563207 VWA7Q9Y334 891 aa15.19■□□□□ 0.02
USB1-208ENST00000563207 DHRS7Q9Y394 339 aa15.19■□□□□ 0.02
USB1-208ENST00000563207 FLNBO75369 2602 aaKnown RBP15.19■□□□□ 0.02
USB1-208ENST00000563207 UBR5O95071 2799 aaPredicted RBP15.18■□□□□ 0.02
USB1-208ENST00000563207 A0A087WUV0 522 aaPredicted RBP15.18■□□□□ 0.02
USB1-208ENST00000563207 NIPSNAP2O75323 286 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 EBLN1P0CF75 366 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 CBSLP0DN79 551 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 MTHFD1P11586 935 aaKnown RBP15.18■□□□□ 0.02
USB1-208ENST00000563207 NR1D1P20393 614 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 SPRP35270 261 aaPredicted RBP15.18■□□□□ 0.02
USB1-208ENST00000563207 CBSP35520 551 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 CLCN7P51798 805 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 ERV3-1Q14264 604 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 GBX1Q14549 363 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 ERCC6LQ2NKX8 1250 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 GRTP1Q5TC63 336 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 LRRC8EQ6NSJ5 796 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 FAM45BPQ6NSW5 357 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 FAM199XQ6PEV8 388 aaPredicted RBP15.18■□□□□ 0.02
USB1-208ENST00000563207 CTAGE3PQ8IX95 158 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 KRT222Q8N1A0 295 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 ZBTB2Q8N680 514 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 FAM45AQ8TCE6 357 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 LKAAEAR1Q8TD35 194 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 TFGQ92734 400 aaPredicted RBP15.18■□□□□ 0.02
USB1-208ENST00000563207 INPP5DQ92835 1189 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 KIAA1143Q96AT1 154 aaPredicted RBP15.18■□□□□ 0.02
USB1-208ENST00000563207 RMDN2Q96LZ7 410 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 C12orf66Q96MD2 445 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 MCMBPQ9BTE3 642 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 TXLNGYQ9BZA5 131 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 ACSS3Q9H6R3 686 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 MVB12BQ9H7P6 319 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 SMYD2Q9NRG4 433 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 EPHA6Q9UF33 1036 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 LNPEPQ9UIQ6 1025 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 CDYLQ9Y232 598 aa15.18■□□□□ 0.02
USB1-208ENST00000563207 SPENQ96T58 3664 aaKnown RBP15.17■□□□□ 0.02
USB1-208ENST00000563207 CXorf49A8MYA2 514 aaPredicted RBP15.17■□□□□ 0.02
USB1-208ENST00000563207 TOX3O15405 576 aaPredicted RBP15.17■□□□□ 0.02
USB1-208ENST00000563207 KATNA1O75449 491 aa15.17■□□□□ 0.02
USB1-208ENST00000563207 ACSL3O95573 720 aa15.17■□□□□ 0.02
USB1-208ENST00000563207 NTRK1P04629 796 aa15.17■□□□□ 0.02
USB1-208ENST00000563207 RPN2P04844 631 aa15.17■□□□□ 0.02
USB1-208ENST00000563207 FAM153BP0C7A2 387 aa15.17■□□□□ 0.02
USB1-208ENST00000563207 MYBL2P10244 700 aa15.17■□□□□ 0.02
USB1-208ENST00000563207 FGF5P12034 268 aa15.17■□□□□ 0.02
USB1-208ENST00000563207 ENO3P13929 434 aaPredicted RBP15.17■□□□□ 0.02
USB1-208ENST00000563207 TCN2P20062 427 aa15.17■□□□□ 0.02
USB1-208ENST00000563207 ACADLP28330 430 aa15.17■□□□□ 0.02
USB1-208ENST00000563207 PDHA2P29803 388 aa15.17■□□□□ 0.02
USB1-208ENST00000563207 PREPP48147 710 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms