RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 PRAMEF9Q5VWM5 478 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 ADNP2Q6IQ32 1131 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 CERS6Q6ZMG9 384 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 ACTR8Q9H981 624 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 POLR1BQ9H9Y6 1135 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 PAK6Q9NQU5 681 aaPredicted RBP14.42□□□□□ -0.1
DDX55-209ENST00000542286 HEBP1Q9NRV9 189 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 B4GALT6Q9UBX8 382 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 PDE10AQ9Y233 779 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 ERGIC3Q9Y282 383 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 CFAP99D6REC4 459 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 GLUD1P00367 558 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 PDYNP01213 254 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 CBX2Q14781 532 aaPredicted RBP14.42□□□□□ -0.1
DDX55-209ENST00000542286 KIAA0040Q15053 153 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 ATP6AP1Q15904 470 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 ZNF697Q5TEC3 545 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 CDC26Q8NHZ8 85 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 ZNF689Q96CS4 500 aaPredicted RBP14.42□□□□□ -0.1
DDX55-209ENST00000542286 NSMCE2Q96MF7 247 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 ZNF583Q96ND8 569 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 INPP5KQ9BT40 448 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 EBPLQ9BY08 206 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 LRRC3Q9BY71 257 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 ACPTQ9BZG2 426 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 TRIM15Q9C019 465 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 PALMDQ9NP74 551 aa14.42□□□□□ -0.1
DDX55-209ENST00000542286 HIDE1A8MVS5 230 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 NOBOXO60393 691 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 CNOT3O75175 753 aaKnown RBP14.41□□□□□ -0.1
DDX55-209ENST00000542286 LRG1P02750 347 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 C1SP09871 688 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 AKT1P31749 480 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 LAPTM4AQ15012 233 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 ZNF783Q6ZMS7 281 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 GCNT7Q6ZNI0 430 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 TNIP2Q8NFZ5 429 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 SLC13A3Q8WWT9 602 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 PDLIM5Q96HC4 596 aaKnown RBP14.41□□□□□ -0.1
DDX55-209ENST00000542286 NTN4Q9HB63 628 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 PRM3Q9NNZ6 103 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 TRBV5-4A0A0C4DH59 114 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 ENO2P09104 434 aaPredicted RBP14.41□□□□□ -0.1
DDX55-209ENST00000542286 TTKP33981 857 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 NEK5Q6P3R8 708 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 C22orf39Q6P5X5 142 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 UBE2R2Q712K3 238 aaPredicted RBP14.41□□□□□ -0.1
DDX55-209ENST00000542286 ITIH5Q86UX2 942 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 TRUB1Q8WWH5 349 aaKnown RBP14.41□□□□□ -0.1
DDX55-209ENST00000542286 GTF2H4Q92759 462 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 ACDQ96AP0 544 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 SUV39H2Q9H5I1 410 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 BRD9Q9H8M2 597 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 SMURF2Q9HAU4 748 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 EXD2Q9NVH0 621 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 GIN1Q9NXP7 522 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 VPS4AQ9UN37 437 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 SLC22A14Q9Y267 594 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 TNPO3Q9Y5L0 923 aaKnown RBP14.41□□□□□ -0.1
DDX55-209ENST00000542286 U3KQV3 271 aa14.41□□□□□ -0.1
DDX55-209ENST00000542286 MANBAO00462 879 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 CLOCKO15516 846 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 STK16O75716 305 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 FGF18O76093 207 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 EPB42P16452 691 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 PRKACGP22612 351 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 ELK4P28324 431 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 CDKN2CP42773 168 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 SLC14A1Q13336 389 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 DDX39BQ13838 428 aaKnown RBP14.4□□□□□ -0.1
DDX55-209ENST00000542286 CCSMST1Q4G0I0 132 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 CNKSR3Q6P9H4 555 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 EFL1Q7Z2Z2 1120 aaKnown RBP14.4□□□□□ -0.1
DDX55-209ENST00000542286 NANOGNBQ7Z5D8 188 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 PTRH1Q86Y79 214 aaKnown RBP14.4□□□□□ -0.1
DDX55-209ENST00000542286 ZC3H7AQ8IWR0 971 aaKnown RBP14.4□□□□□ -0.1
DDX55-209ENST00000542286 SLC7A5P1Q8MH63 180 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 COPS8Q99627 209 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 P2RY13Q9BPV8 354 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 HERC2P3Q9BVR0 1158 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 DPY30Q9C005 99 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 LRTM1Q9HBL6 345 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 NOTCH4Q99466 2003 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 MYCLP1P12525 358 aaPredicted RBP14.4□□□□□ -0.1
DDX55-209ENST00000542286 CD9P21926 228 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 MYF6P23409 242 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 RPS3AP61247 264 aaKnown RBP14.4□□□□□ -0.1
DDX55-209ENST00000542286 WDR5P61964 334 aaKnown RBP14.4□□□□□ -0.1
DDX55-209ENST00000542286 MAPKAPK3Q16644 382 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 TRIM16LQ309B1 348 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 CYBRD1Q53TN4 286 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 TMEM215Q68D42 235 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 GALNT18Q6P9A2 607 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 Q6ZVL8 140 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 FIBINQ8TAL6 211 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 ITFG1Q8TB96 612 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 TAMM41Q96BW9 452 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 RC3H2Q9HBD1 1191 aaKnown RBP14.4□□□□□ -0.1
DDX55-209ENST00000542286 ATAD3AQ9NVI7 634 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 LIMD1Q9UGP4 676 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms