RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 MAGEA3P43357 314 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 CLCNKAP51800 687 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 CRADDP78560 199 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 SIM1P81133 766 aaPredicted RBP6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 CACNG1Q06432 222 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 ILF3Q12906 894 aaKnown RBP eCLIP6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 ZRANB3Q5FWF4 1079 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 PPM1JQ5JR12 505 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 N4BP2L1Q5TBK1 243 aaPredicted RBP6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 TMEM220Q6QAJ8 160 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 CEP128Q6ZU80 1094 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 TMEM135Q86UB9 458 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 SLCO6A1Q86UG4 719 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 ZNF227Q86WZ6 799 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 GALNT13Q8IUC8 556 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 ZNF547Q8IVP9 402 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 SULF2Q8IWU5 870 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 PIANPQ8IYJ0 282 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 NXPE1Q8N323 547 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 MPP5Q8N3R9 675 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 LSMEM1Q8N8F7 131 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 RASGEF1AQ8N9B8 481 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 FAM46DQ8NEK8 389 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 C1orf162Q8NEQ5 155 aaPredicted RBP6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 OR4L1Q8NH43 312 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 GOT1L1Q8NHS2 421 aaPredicted RBP6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 HEXDCQ8WVB3 486 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 ARL8AQ96BM9 186 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 ULK4Q96C45 1275 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 AHCYL2Q96HN2 611 aaKnown RBP6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 SIGLEC10Q96LC7 697 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 CCDC138Q96M89 665 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 CATSPER2Q96P56 530 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 SERPINB12Q96P63 405 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 OR2M4Q96R27 311 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 ERP44Q9BS26 406 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 GSDMCQ9BYG8 508 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 GSX2Q9BZM3 304 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 FAM96AQ9H5X1 160 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 MRM3Q9HC36 420 aaKnown RBP6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 XAB2Q9HCS7 855 aaKnown RBP6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 TREX1Q9NSU2 369 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 SYBUQ9NX95 663 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 TOR4AQ9NXH8 423 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 FTSJ1Q9UET6 329 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 SLC2A6Q9UGQ3 507 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 SH3BGRL2Q9UJC5 107 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 SOX13Q9UN79 622 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 U3KQA8 63 aa6.15□□□□□ -1.43
ATPAF1-209ENST00000529214 IGLV3-16A0A075B6K0 115 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 TMEM247A6NEH6 219 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 OR51F1A6NGY5 319 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 PRR19A6NJB7 356 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 EFCAB8A8MWE9 144 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 RAD51CO43502 376 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 NOBOXO60393 691 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 TMEM127O75204 238 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 POP7O75817 140 aaKnown RBP6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 SASH3O75995 380 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 SEC31AO94979 1220 aaKnown RBP6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 GOT2P00505 430 aaKnown RBP6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 NPPAP01160 153 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 PRSS56P0CW18 603 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 MYF5P13349 255 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 ATP1B2P14415 290 aaPredicted RBP6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 ATP6V1B1P15313 513 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 ZNF7P17097 686 aaPredicted RBP6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 MSH3P20585 1137 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 ACRV1P26436 265 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 HOXC12P31275 282 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 FOXN2P32314 431 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 ACTR1BP42025 376 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 RPIAP49247 311 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 DUSP3P51452 185 aaPredicted RBP6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 CTSCP53634 463 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 ACTR1AP61163 376 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 MRPS25P82663 173 aaKnown RBP6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 MRPS15P82914 257 aaKnown RBP6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 B4GALNT1Q00973 533 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 CKAP4Q07065 602 aaKnown RBP6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 C2orf54Q08AI8 447 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 DNAJC3Q13217 504 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 DYNC1I2Q13409 638 aaKnown RBP6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 MORF4L2Q15014 288 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 WHAMMP3Q1A5X7 153 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 PLA2G4EQ3MJ16 856 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 CFAP157Q5JU67 520 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 BEND6Q5SZJ8 279 aaPredicted RBP6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 IZUMO3Q5VZ72 239 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 CES3Q6UWW8 571 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 CCDC121Q6ZUS5 278 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 TAS2R42Q7RTR8 314 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 LRRTM4Q86VH4 590 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 SERPINA9Q86WD7 417 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 C17orf82Q86X59 251 aaPredicted RBP6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 SLC35F3Q8IY50 421 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 AGGF1Q8N302 714 aaeCLIP6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 PNPLA1Q8N8W4 532 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 GPR156Q8NFN8 814 aa6.14□□□□□ -1.43
ATPAF1-209ENST00000529214 DYDC1Q8WWB3 177 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms