RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 OARD1Q9Y530 152 aa14.51□□□□□ -0.09
NUP54-213ENST00000513352 CFAP54Q96N23 3096 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 A0A1W2PQM1 296 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 PIPSLA2A3N6 862 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 FAM221BA6H8Z2 402 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 OR5K3A6NET4 321 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 ZNF839A8K0R7 811 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 ISM1B1AKI9 464 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 COPEO14579 308 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 SLC16A8O95907 504 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 CHRM5P08912 532 aaPredicted RBP14.5□□□□□ -0.09
NUP54-213ENST00000513352 TPBGLP0DKB5 382 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 KRT4P19013 534 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 CSF2RBP32927 897 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 CAPZBP47756 277 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 PNLIPRP1P54315 467 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 AP1S2P56377 157 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 CLDN6P56747 220 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 GRB7Q14451 532 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 PUM1Q14671 1186 aaKnown RBP eCLIP14.5□□□□□ -0.09
NUP54-213ENST00000513352 ACAP2Q15057 778 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 PPP1R3AQ16821 1122 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 TRABD2AQ86V40 505 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 RASGRP3Q8IV61 690 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 PPFIBP2Q8ND30 876 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 OR2L8Q8NGY9 312 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 WDR48Q8TAF3 677 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 STAG3L4Q8TBR4 150 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 MED8Q96G25 268 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 CCDC138Q96M89 665 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 OR6C2Q9NZP2 312 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 OGFRQ9NZT2 677 aa14.5□□□□□ -0.09
NUP54-213ENST00000513352 SYCE1LA8MT33 242 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 C2orf74A8MZ97 194 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 D6RAR5 112 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 UBXN8O00124 270 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 BTN3A3O00478 584 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 CAPN5O15484 640 aaPredicted RBP14.49□□□□□ -0.09
NUP54-213ENST00000513352 KERAO60938 352 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 GLRA3O75311 464 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 RASSF9O75901 435 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 CPNE6O95741 557 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 ANXA5P08758 320 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 RBP1P09455 135 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 MPSTP25325 297 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 RPA3P35244 121 aaPredicted RBP14.49□□□□□ -0.09
NUP54-213ENST00000513352 HSD17B2P37059 387 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 GFERP55789 205 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 PPP1CAP62136 330 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 FASTKQ14296 549 aaKnown RBP14.49□□□□□ -0.09
NUP54-213ENST00000513352 TGFBIQ15582 683 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 TECRLQ5HYJ1 363 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 PHF19Q5T6S3 580 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 THEMIS2Q5TEJ8 643 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 SUSD1Q6UWL2 747 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 RBM44Q6ZP01 1051 aaKnown RBP14.49□□□□□ -0.09
NUP54-213ENST00000513352 FAM92BQ6ZTR7 304 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 CLEC14AQ86T13 490 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 ISCA2Q86U28 154 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 PLXDC1Q8IUK5 500 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 ADGRF3Q8IZF5 1079 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 DENND1AQ8TEH3 1009 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 ATL1Q8WXF7 558 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 SMC6Q96SB8 1091 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 IQCGQ9H095 443 aaKnown RBP14.49□□□□□ -0.09
NUP54-213ENST00000513352 ATG10Q9H0Y0 220 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 STMN4Q9H169 189 aaPredicted RBP14.49□□□□□ -0.09
NUP54-213ENST00000513352 DLL3Q9NYJ7 618 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 ACTR10Q9NZ32 417 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 WWOXQ9NZC7 414 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 TMEM9Q9P0T7 183 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 STOX2Q9P2F5 926 aaPredicted RBP14.49□□□□□ -0.09
NUP54-213ENST00000513352 CPSF2Q9P2I0 782 aaKnown RBP14.49□□□□□ -0.09
NUP54-213ENST00000513352 XPR1Q9UBH6 696 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 PCM1Q15154 2024 aa14.49□□□□□ -0.09
NUP54-213ENST00000513352 A8MU76 341 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 AGRPO00253 132 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 MATN2O00339 956 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 GSTA1P08263 222 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 CDK4P11802 303 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 GFAPP14136 432 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 IMPA1P29218 277 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 ID4P47928 161 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 INSM1Q01101 510 aaPredicted RBP14.48□□□□□ -0.09
NUP54-213ENST00000513352 NAE1Q13564 534 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 ARHGAP19Q14CB8 494 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 CYP2A13Q16696 494 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 HES3Q5TGS1 186 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 C16orf46Q6P387 395 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 AGTRAPQ6RW13 159 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 GOLGA6L1Q8N7Z2 621 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 CCDC63Q8NA47 563 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 LINC01555Q8NAE3 123 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 ZNF480Q8WV37 535 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 SMPDL3AQ92484 453 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 FBXL8Q96CD0 374 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 ZDHHC12Q96GR4 267 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 DPYSL5Q9BPU6 564 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 MENTQ9BUN1 341 aa14.48□□□□□ -0.09
NUP54-213ENST00000513352 ACAT2Q9BWD1 397 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms