RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 TMEM139Q8IV31 216 aa5.08□□□□□ -1.6
SSR3-208ENST00000496050 NUP93Q8N1F7 819 aa5.08□□□□□ -1.6
SSR3-208ENST00000496050 ANKRD13CQ8N6S4 541 aa5.08□□□□□ -1.6
SSR3-208ENST00000496050 ATAD1Q8NBU5 361 aa5.08□□□□□ -1.6
SSR3-208ENST00000496050 OR13A1Q8NGR1 328 aa5.08□□□□□ -1.6
SSR3-208ENST00000496050 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.08□□□□□ -1.6
SSR3-208ENST00000496050 AFAP1L1Q8TED9 768 aa5.08□□□□□ -1.6
SSR3-208ENST00000496050 HEXDCQ8WVB3 486 aa5.08□□□□□ -1.6
SSR3-208ENST00000496050 RAD54LQ92698 747 aa5.08□□□□□ -1.6
SSR3-208ENST00000496050 PARK7Q99497 189 aaKnown RBP5.08□□□□□ -1.6
SSR3-208ENST00000496050 RAD9AQ99638 391 aa5.08□□□□□ -1.6
SSR3-208ENST00000496050 PRRG4Q9BZD6 226 aa5.08□□□□□ -1.6
SSR3-208ENST00000496050 SNX25Q9H3E2 840 aa5.08□□□□□ -1.6
SSR3-208ENST00000496050 DNAJC4Q9NNZ3 241 aa5.08□□□□□ -1.6
SSR3-208ENST00000496050 ECHDC1Q9NTX5 307 aa5.08□□□□□ -1.6
SSR3-208ENST00000496050 LEF1Q9UJU2 399 aaPredicted RBP5.08□□□□□ -1.6
SSR3-208ENST00000496050 TRIM17Q9Y577 477 aa5.08□□□□□ -1.6
SSR3-208ENST00000496050 A0A0U1RQK1 487 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 ZNF320A2RRD8 509 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 RPS6KA5O75582 802 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 PGLSO95336 258 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 FGF3P11487 239 aaPredicted RBP5.07□□□□□ -1.6
SSR3-208ENST00000496050 CETPP11597 493 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 EPCAMP16422 314 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 MSH3P20585 1137 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 JAK1P23458 1154 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 DGKAP23743 735 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 EPHA2P29317 976 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 TKTP29401 623 aaKnown RBP5.07□□□□□ -1.6
SSR3-208ENST00000496050 RGS7P49802 495 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 COASYQ13057 564 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 TNK1Q13470 666 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 CA9Q16790 459 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 MEP1BQ16820 701 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 ANKRD20A4Q4UJ75 823 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 ANKRD20A8PQ5CZ79 823 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 ANKRD20A2Q5SQ80 823 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 ANKRD20A1Q5TYW2 823 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 ANKRD20A3Q5VUR7 823 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 ZNF517Q6ZMY9 492 aaPredicted RBP5.07□□□□□ -1.6
SSR3-208ENST00000496050 LINC00696Q6ZRV3 163 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 PIWIL3Q7Z3Z3 882 aaKnown RBP5.07□□□□□ -1.6
SSR3-208ENST00000496050 HOOK3Q86VS8 718 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 UNC45BQ8IWX7 931 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 NDUFAF2Q8N183 169 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 NHLRC2Q8NBF2 726 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 DMBX1Q8NFW5 382 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 CTCFLQ8NI51 663 aaPredicted RBP5.07□□□□□ -1.6
SSR3-208ENST00000496050 VANGL1Q8TAA9 524 aaPredicted RBP5.07□□□□□ -1.6
SSR3-208ENST00000496050 ZNF473Q8WTR7 871 aaKnown RBP5.07□□□□□ -1.6
SSR3-208ENST00000496050 PROX1Q92786 737 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 DNASE1L2Q92874 299 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 EXOC4Q96A65 974 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 WACQ9BTA9 647 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 PELI2Q9HAT8 420 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 UPF2Q9HAU5 1272 aaKnown RBP5.07□□□□□ -1.6
SSR3-208ENST00000496050 GSN-AS1Q9NRJ2 163 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 FAM118AQ9NWS6 357 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 ITGA11Q9UKX5 1188 aa5.07□□□□□ -1.6
SSR3-208ENST00000496050 ANKRD61A6NGH8 418 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 C5orf52A6NGY3 159 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 FAM86B1E9PN63 330 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 SLC30A4O14863 429 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 PRKRAO75569 313 aaKnown RBP5.06□□□□□ -1.6
SSR3-208ENST00000496050 PIGNO95427 931 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 CAVIN2O95810 425 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 RLN1P04808 185 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 ATP1A1P05023 1023 aaKnown RBP5.06□□□□□ -1.6
SSR3-208ENST00000496050 FAM86B2P0C5J1 330 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 SPP1P10451 314 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 HAPLN1P10915 354 aaPredicted RBP5.06□□□□□ -1.6
SSR3-208ENST00000496050 FGF5P12034 268 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 CDH11P55287 796 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 DMP1Q13316 513 aaPredicted RBP5.06□□□□□ -1.6
SSR3-208ENST00000496050 NFE2L1Q14494 772 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 SLMAPQ14BN4 828 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 RRS1Q15050 365 aaKnown RBP5.06□□□□□ -1.6
SSR3-208ENST00000496050 NPTX1Q15818 432 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 ODF4Q2M2E3 257 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 UGT3A2Q3SY77 523 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 ACCSLQ4AC99 568 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 ZNF324BQ6AW86 544 aaPredicted RBP5.06□□□□□ -1.6
SSR3-208ENST00000496050 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.06□□□□□ -1.6
SSR3-208ENST00000496050 NRARPQ7Z6K4 114 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 SNX32Q86XE0 403 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 MSANTD4Q8NCY6 345 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 OR2T12Q8NG77 320 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 OR4K1Q8NGD4 311 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 OR1J1Q8NGS3 322 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 HSD17B8Q92506 261 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 SPATA33Q96N06 139 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 ZNF583Q96ND8 569 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 S1PR5Q9H228 398 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 RETREG1Q9H6L5 497 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 TRPV4Q9HBA0 871 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 ZDHHC2Q9UIJ5 367 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 FAF1Q9UNN5 650 aaPredicted RBP5.06□□□□□ -1.6
SSR3-208ENST00000496050 LIPT1Q9Y234 373 aa5.06□□□□□ -1.6
SSR3-208ENST00000496050 TRIP12Q14669 1992 aaPredicted RBP5.05□□□□□ -1.6
SSR3-208ENST00000496050 TRAV24A0A0B4J272 114 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms