RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 GPSM3Q9Y4H4 160 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 OARD1Q9Y530 152 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 SRRM3A6NNA2 597 aaPredicted RBP12.91□□□□□ -0.34
BRAT1-205ENST00000473879 NTN3O00634 580 aaPredicted RBP12.91□□□□□ -0.34
BRAT1-205ENST00000473879 KLF11O14901 512 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 SNX2O60749 519 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 TRIM13O60858 407 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 SHOX2O60902 331 aaPredicted RBP12.91□□□□□ -0.34
BRAT1-205ENST00000473879 CSO75390 466 aaKnown RBP12.91□□□□□ -0.34
BRAT1-205ENST00000473879 CATP04040 527 aaKnown RBP12.91□□□□□ -0.34
BRAT1-205ENST00000473879 SBK3P0C264 359 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 ACP5P13686 325 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 GFAPP14136 432 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 AK4P27144 223 aaPredicted RBP12.91□□□□□ -0.34
BRAT1-205ENST00000473879 LSP1P33241 339 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 PREPP48147 710 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 CLCNKAP51800 687 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 CBX1P83916 185 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 LRP8Q14114 963 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 NFE2L1Q14494 772 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 CHI3L2Q15782 390 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 TTC19Q6DKK2 380 aaPredicted RBP12.91□□□□□ -0.34
BRAT1-205ENST00000473879 SBSNQ6UWP8 590 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 CYHR1Q6ZMK1 362 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 RBM44Q6ZP01 1051 aaKnown RBP12.91□□□□□ -0.34
BRAT1-205ENST00000473879 RGS9BPQ6ZS82 235 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 UBE2R2Q712K3 238 aaPredicted RBP12.91□□□□□ -0.34
BRAT1-205ENST00000473879 CHST15Q7LFX5 561 aaPredicted RBP12.91□□□□□ -0.34
BRAT1-205ENST00000473879 VRK3Q8IV63 474 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 C10orf107Q8IVU9 208 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 SPNS2Q8IVW8 549 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 CCDC74AQ96AQ1 378 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 MANSC1Q9H8J5 431 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 RDH14Q9HBH5 336 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 OXSMQ9NWU1 459 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 TAAR2Q9P1P5 351 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 LAMA5O15230 3695 aa12.91□□□□□ -0.34
BRAT1-205ENST00000473879 ASXL3Q9C0F0 2248 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 A8MT66 165 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 B4DGG1 531 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 UBXN8O00124 270 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 IFRD1O00458 451 aaPredicted RBP12.9□□□□□ -0.34
BRAT1-205ENST00000473879 NUDT21O43809 227 aaKnown RBP12.9□□□□□ -0.34
BRAT1-205ENST00000473879 DLX3O60479 287 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 IPO13O94829 963 aaKnown RBP12.9□□□□□ -0.34
BRAT1-205ENST00000473879 MATN4O95460 622 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 RPN2P04844 631 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 SERPINE1P05121 402 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 HIST1H2AGP0C0S8 130 aaPredicted RBP12.9□□□□□ -0.34
BRAT1-205ENST00000473879 SLC35G4P0C7Q5 338 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 HIST1H2ADP20671 130 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 BGNP21810 368 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 GRK2P25098 689 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 MAP4P27816 1152 aaKnown RBP12.9□□□□□ -0.34
BRAT1-205ENST00000473879 DNAJB13P59910 316 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 NAA20P61599 178 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 CDKL1Q00532 357 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 TGFBIQ15582 683 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 PPP1R3AQ16821 1122 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 ISXQ2M1V0 245 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 CDKL4Q5MAI5 379 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 METRNLQ641Q3 311 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 SLC30A9Q6PML9 568 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 UNC5DQ6UXZ4 953 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 PDZD3Q86UT5 571 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 SFTPA2Q8IWL1 248 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 FBXO39Q8N4B4 442 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 ZDHHC1Q8WTX9 485 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 ASB11Q8WXH4 323 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 ZNF75CPQ92670 426 aaPredicted RBP12.9□□□□□ -0.34
BRAT1-205ENST00000473879 HIST1H2AHQ96KK5 128 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 HIST1H2AJQ99878 128 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 H2AFJQ9BTM1 129 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 SLC12A9Q9BXP2 914 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 NSRP1Q9H0G5 558 aaKnown RBP12.9□□□□□ -0.34
BRAT1-205ENST00000473879 OSGEPL1Q9H4B0 414 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 KLC4Q9NSK0 619 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 CD274Q9NZQ7 290 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 LRIT1Q9P2V4 623 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 IKZF3Q9UKT9 509 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 DNAJC16Q9Y2G8 782 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 AK5Q9Y6K8 562 aa12.9□□□□□ -0.34
BRAT1-205ENST00000473879 RP1P56715 2156 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 TMEM114B3SHH9 223 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 STX16-NPEPL1H3BU86 382 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 GFYI3L273 518 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 STX16O14662 325 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 PSIP1O75475 530 aaKnown RBP12.89□□□□□ -0.35
BRAT1-205ENST00000473879 FGF3P11487 239 aaPredicted RBP12.89□□□□□ -0.35
BRAT1-205ENST00000473879 IDSP22304 550 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 SERPINB5P36952 375 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 ACTR1BP42025 376 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 ALDH18A1P54886 795 aaKnown RBP12.89□□□□□ -0.35
BRAT1-205ENST00000473879 AP1S2P56377 157 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 ACTR1AP61163 376 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 CCL7P80098 99 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 STX3Q13277 289 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 SPIDRQ14159 915 aa12.89□□□□□ -0.35
BRAT1-205ENST00000473879 FAM83HQ6ZRV2 1179 aaPredicted RBP12.89□□□□□ -0.35
BRAT1-205ENST00000473879 NAGSQ8N159 534 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms