RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 TUBB2BQ9BVA1 445 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 SPRY4Q9C004 299 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 KLHL25Q9H0H3 589 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 PDE7BQ9NP56 450 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 SAYSD1Q9NPB0 183 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 SPATA7Q9P0W8 599 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 KLHL42Q9P2K6 505 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 LNPEPQ9UIQ6 1025 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 TRMT6Q9UJA5 497 aaKnown RBP12.47□□□□□ -0.41
COL5A1-206ENST00000465877 SLC39A10Q9ULF5 831 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 CORO1CQ9ULV4 474 aaPredicted RBP12.47□□□□□ -0.41
COL5A1-206ENST00000465877 DHRS7Q9Y394 339 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 HEATR5BQ9P2D3 2071 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 SPTBP11277 2137 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 TEX51A0A1B0GUA7 166 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 ISM1B1AKI9 464 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 EIF3FO00303 357 aaPredicted RBP12.46□□□□□ -0.41
COL5A1-206ENST00000465877 SPAG6O75602 509 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 KIAA0754O94854 1291 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 AHSGP02765 367 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 CATP04040 527 aaKnown RBP12.46□□□□□ -0.41
COL5A1-206ENST00000465877 MPC1LP0DKB6 136 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 CBSLP0DN79 551 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 ERGP11308 486 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 CBSP35520 551 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 SLC7A5Q01650 507 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 CAV1Q03135 178 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 MGAT5Q09328 741 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 MAP7Q14244 749 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 SLC5A12Q1EHB4 618 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 ZDHHC24Q6UX98 284 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 CCDC81Q6ZN84 652 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 TIPARPQ7Z3E1 657 aaKnown RBP12.46□□□□□ -0.41
COL5A1-206ENST00000465877 PIWIL4Q7Z3Z4 852 aaKnown RBP12.46□□□□□ -0.41
COL5A1-206ENST00000465877 LMNTD1Q8N9Z9 388 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 MAGEC3Q8TD91 643 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 DENND1AQ8TEH3 1009 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 PYROXD1Q8WU10 500 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 INPP5DQ92835 1189 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 FAM114A2Q9NRY5 505 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 TAS2R13Q9NYV9 303 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 MOCS1Q9NZB8 636 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 PSAT1Q9Y617 370 aa12.46□□□□□ -0.41
COL5A1-206ENST00000465877 MDC1Q14676 2089 aaKnown RBP12.46□□□□□ -0.42
COL5A1-206ENST00000465877 NUP210LQ5VU65 1888 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 K7ENP7 123 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 MYO1CO00159 1063 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 KALRNO60229 2985 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 MSL3P1P0C860 447 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 LIFP15018 202 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 FDXRP22570 491 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 MCM3P25205 808 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 PSMB5P28074 263 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 CDKN2DP55273 166 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 TIAL1Q01085 375 aaKnown RBP eCLIP12.45□□□□□ -0.42
COL5A1-206ENST00000465877 VAC14Q08AM6 782 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 TRADDQ15628 312 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 DEFB110Q30KQ9 67 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 ARHGAP40Q5TG30 622 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 LRRC8EQ6NSJ5 796 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 FAM45BPQ6NSW5 357 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 PWWP2BQ6NUJ5 590 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 UGT3A1Q6NUS8 523 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 INO80CQ6PI98 192 aaPredicted RBP12.45□□□□□ -0.42
COL5A1-206ENST00000465877 CDHR3Q6ZTQ4 885 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 GPR155Q7Z3F1 870 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 SLC26A11Q86WA9 606 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 CCDC25Q86WR0 208 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 C2orf73Q8N5S3 287 aaPredicted RBP12.45□□□□□ -0.42
COL5A1-206ENST00000465877 ESX1Q8N693 406 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 GPATCH11Q8N954 259 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 NOA1Q8NC60 698 aaKnown RBP12.45□□□□□ -0.42
COL5A1-206ENST00000465877 GALNT6Q8NCL4 622 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 MNS1Q8NEH6 495 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 OR8K5Q8NH50 307 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 HMGCLL1Q8TB92 370 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 FAM45AQ8TCE6 357 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 SNRNP27Q8WVK2 155 aaKnown RBP12.45□□□□□ -0.42
COL5A1-206ENST00000465877 SLC22A18Q96BI1 424 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 LRRC1Q9BTT6 524 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 SYTL2Q9HCH5 934 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 RALYQ9UKM9 306 aaKnown RBP12.45□□□□□ -0.42
COL5A1-206ENST00000465877 PCDHGA4Q9Y5G9 962 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 BOD1L1Q8NFC6 3051 aa12.45□□□□□ -0.42
COL5A1-206ENST00000465877 TCRBV9S1A1TA0A576 114 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 CTAGE15A4D2H0 777 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 TMEM150CB9EJG8 249 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 MAP3K7O43318 606 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 CPNE3O75131 537 aaKnown RBP12.44□□□□□ -0.42
COL5A1-206ENST00000465877 SCRG1O75711 98 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 CTAGE8P0CG41 777 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 WT1P19544 449 aaPredicted RBP12.44□□□□□ -0.42
COL5A1-206ENST00000465877 MAGP20916 626 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 MAP4P27816 1152 aaKnown RBP12.44□□□□□ -0.42
COL5A1-206ENST00000465877 SSTR1P30872 391 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 STAT5AP42229 794 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 RGS4P49798 205 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 ABHD18Q0P651 414 aa12.44□□□□□ -0.42
COL5A1-206ENST00000465877 PDAP1Q13442 181 aaKnown RBP12.44□□□□□ -0.42
COL5A1-206ENST00000465877 HECTD2Q5U5R9 776 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms