RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 DNAJB5O75953 348 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 LRATO95237 230 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 SPNP16150 400 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 MAP2K5Q13163 448 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 SF3B4Q15427 424 aaKnown RBP eCLIP11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 USP39Q53GS9 565 aaKnown RBP11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 PRSS36Q5K4E3 855 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 COLEC12Q5KU26 742 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 MORN1Q5T089 497 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 AHSA2Q719I0 299 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 ZNF598Q86UK7 904 aaKnown RBP11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 PHF10Q8WUB8 498 aaKnown RBP11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 DACH2Q96NX9 599 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 CIPCQ9C0C6 399 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 LRTM1Q9HBL6 345 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 SIRT5Q9NXA8 310 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 MICAL3Q7RTP6 2002 aa11.46□□□□□ -0.58
PDZRN3-203ENST00000462146 LOC730098B7Z3J9 87 aa11.46□□□□□ -0.58
PDZRN3-203ENST00000462146 CBX4O00257 560 aa11.46□□□□□ -0.58
PDZRN3-203ENST00000462146 S100BP04271 92 aaPredicted RBP11.46□□□□□ -0.58
PDZRN3-203ENST00000462146 BCKDHAP12694 445 aa11.46□□□□□ -0.58
PDZRN3-203ENST00000462146 CD36P16671 472 aa11.46□□□□□ -0.58
PDZRN3-203ENST00000462146 JUNDP17535 347 aa11.46□□□□□ -0.58
PDZRN3-203ENST00000462146 CTPS1P17812 591 aa11.46□□□□□ -0.58
PDZRN3-203ENST00000462146 TACR1P25103 407 aa11.46□□□□□ -0.58
PDZRN3-203ENST00000462146 EIF2DP41214 584 aaKnown RBP11.46□□□□□ -0.58
PDZRN3-203ENST00000462146 GNPDA1P46926 289 aa11.46□□□□□ -0.58
PDZRN3-203ENST00000462146 SERPINB10P48595 397 aa11.46□□□□□ -0.58
PDZRN3-203ENST00000462146 ALDH7A1P49419 539 aaKnown RBP11.46□□□□□ -0.58
PDZRN3-203ENST00000462146 CAPN13Q6MZZ7 669 aaPredicted RBP11.46□□□□□ -0.58
PDZRN3-203ENST00000462146 Q6ZPB1 254 aaPredicted RBP11.46□□□□□ -0.58
PDZRN3-203ENST00000462146 FAM83FQ8NEG4 500 aaPredicted RBP11.46□□□□□ -0.58
PDZRN3-203ENST00000462146 C8orf48Q96LL4 319 aa11.46□□□□□ -0.58
PDZRN3-203ENST00000462146 TSSK3Q96PN8 268 aa11.46□□□□□ -0.58
PDZRN3-203ENST00000462146 MAGIXQ9H6Y5 334 aa11.46□□□□□ -0.58
PDZRN3-203ENST00000462146 DHRS7Q9Y394 339 aa11.46□□□□□ -0.58
PDZRN3-203ENST00000462146 TMED5Q9Y3A6 229 aa11.46□□□□□ -0.58
PDZRN3-203ENST00000462146 ANGPTL3Q9Y5C1 460 aa11.46□□□□□ -0.58
PDZRN3-203ENST00000462146 PFDN6O15212 129 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 TBX1O43435 398 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 ZNF623O75123 536 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 F11P03951 625 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 IL6P05231 212 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 ALPIP09923 528 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 CLCN4P51793 760 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 VLDLRP98155 873 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 MVKQ03426 396 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 IL18R1Q13478 541 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 GNASQ5JWF2 1037 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 FAM151BQ6UXP7 276 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 ADAMTSL2Q86TH1 951 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 TTC29Q8NA56 475 aaPredicted RBP11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 MINDY2Q8NBR6 621 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 RNF167Q9H6Y7 350 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 ITM2CQ9NQX7 267 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 WWOXQ9NZC7 414 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 PDP1Q9P0J1 537 aaPredicted RBP11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 OSGIN1Q9UJX0 560 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 PPT2Q9UMR5 302 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 TPRKBQ9Y3C4 175 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 ARIH1Q9Y4X5 557 aaPredicted RBP11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 TNPO3Q9Y5L0 923 aaKnown RBP11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 UPK3BL1B0FP48 263 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 UPK3BL2E5RIL1 263 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 RAD51BO15315 384 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 RGS10O43665 173 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 ULK1O75385 1050 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 KCNK2O95069 426 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 ESR1P03372 595 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 PTPN6P29350 595 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 LIPAP38571 399 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 OR1G1P47890 313 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 ST13P50502 369 aaKnown RBP11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 HUNKP57058 714 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 MAD2L1BPQ15013 274 aaPredicted RBP11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 ZC3H12BQ5HYM0 836 aaKnown RBP11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 CACHD1Q5VU97 1274 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 FAM171A1Q5VUB5 890 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 KDM4DQ6B0I6 523 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 DOK6Q6PKX4 331 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 C16orf59Q7L2K0 433 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 PLD3Q8IV08 490 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 LYSMD2Q8IV50 215 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 OR52E4Q8NGH9 312 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 RHOXF1Q8NHV9 184 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 MCFD2Q8NI22 146 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 EGLN2Q96KS0 407 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 SEPT5Q99719 369 aaPredicted RBP11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 ACPTQ9BZG2 426 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 RMND5AQ9H871 391 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 VPS9D1Q9Y2B5 631 aa11.45□□□□□ -0.58
PDZRN3-203ENST00000462146 EFCAB9A8MZ26 197 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 H0Y626 953 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 WBP4O75554 376 aaKnown RBP11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 TRIM16O95361 564 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 GTF2E2P29084 291 aaKnown RBP11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 PTGER3P43115 390 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 MAGEA2P43356 314 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 NEK2P51955 445 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 1635.1 ms