RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 A0A0A6YYK5 440 aaPredicted RBP4.87□□□□□ -1.63
EPHA3-202ENST00000452448 SLC22A31A6NKX4 558 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 A8MV72 311 aaPredicted RBP4.87□□□□□ -1.63
EPHA3-202ENST00000452448 ZNF487B1APH4 448 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 I3L4J1 428 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 ZNF213O14771 459 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 TFECO14948 347 aaPredicted RBP4.87□□□□□ -1.63
EPHA3-202ENST00000452448 SUV39H1O43463 412 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 TLX3O43711 291 aaPredicted RBP4.87□□□□□ -1.63
EPHA3-202ENST00000452448 DYRK3O43781 588 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 DPM1O60762 260 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 PRAMEF2O60811 474 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 UNC5CO95185 931 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 BMP15O95972 392 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 PNPP00491 289 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 RPLP1P05386 114 aaKnown RBP4.87□□□□□ -1.63
EPHA3-202ENST00000452448 TFAP2AP05549 437 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 SMIM18P0DKX4 95 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 MBL2P11226 248 aaPredicted RBP4.87□□□□□ -1.63
EPHA3-202ENST00000452448 BRAFP15056 766 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 CDH2P19022 906 aaPredicted RBP4.87□□□□□ -1.63
EPHA3-202ENST00000452448 ILF2Q12905 390 aaKnown RBP4.87□□□□□ -1.63
EPHA3-202ENST00000452448 GANABQ14697 944 aaKnown RBP4.87□□□□□ -1.63
EPHA3-202ENST00000452448 NECTIN1Q15223 517 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 FAM47AQ5JRC9 791 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 BEND3Q5T5X7 828 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 PIP5KL1Q5T9C9 394 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 DDI2Q5TDH0 399 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 RAP1GAP2Q684P5 730 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 SCARA3Q6AZY7 606 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 BRAT1Q6PJG6 821 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 RBM43Q6ZSC3 357 aaKnown RBP4.87□□□□□ -1.63
EPHA3-202ENST00000452448 SMIM15Q7Z3B0 74 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 HAUS6Q7Z4H7 955 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 ZNF410Q86VK4 478 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 POU5F2Q8N7G0 328 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 PLA2G15Q8NCC3 412 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 NUDT10Q8NFP7 164 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 ST8SIA4Q92187 359 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 NR4A3Q92570 626 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 ESR2Q92731 530 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 ADIPOR1Q96A54 375 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 SGTBQ96EQ0 304 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 PACRGQ96M98 296 aaPredicted RBP4.87□□□□□ -1.63
EPHA3-202ENST00000452448 ZNF317Q96PQ6 595 aaPredicted RBP4.87□□□□□ -1.63
EPHA3-202ENST00000452448 TAAR1Q96RJ0 339 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 GSX2Q9BZM3 304 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 MCOLN1Q9GZU1 580 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 TMEM117Q9H0C3 514 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 RXFP1Q9HBX9 757 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 CCM2LQ9NUG4 571 aaPredicted RBP4.87□□□□□ -1.63
EPHA3-202ENST00000452448 TAS2R1Q9NYW7 299 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 KANSL3Q9P2N6 904 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 MAN1B1Q9UKM7 699 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 AMFRQ9UKV5 643 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 KCNH3Q9ULD8 1083 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 PCDHA9Q9Y5H5 950 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 NCAPD2Q15021 1401 aa4.87□□□□□ -1.63
EPHA3-202ENST00000452448 FAM205AQ6ZU69 1335 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 CACNA1FO60840 1977 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 TRAV34A0A0B4J273 112 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 AQP12BA6NM10 295 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 KLRF2D3W0D1 207 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 H3BML4 177 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 SLC43A1O75387 559 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 CSH1P0DML2 217 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 CSH2P0DML3 217 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 ERCC2P18074 760 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 ITGA6P23229 1130 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 GCH1P30793 250 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 HOXC9P31274 260 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 CHRNA3P32297 505 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 NNMTP40261 264 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 RAD23AP54725 363 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 CDH13P55290 713 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 PKNOX1P55347 436 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 CXCR4P61073 352 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 FOXO4P98177 505 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 SP2Q02086 613 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 POU4F2Q12837 409 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 NPRL3Q12980 569 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 SRSF5Q13243 272 aaKnown RBP4.86□□□□□ -1.63
EPHA3-202ENST00000452448 ITGADQ13349 1161 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 BTN1A1Q13410 526 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 NAE1Q13564 534 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 TP53BP2Q13625 1128 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 GPR68Q15743 365 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 MOGAT2Q3SYC2 334 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 EXOSC6Q5RKV6 272 aaKnown RBP4.86□□□□□ -1.63
EPHA3-202ENST00000452448 BROXQ5VW32 411 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 RSBN1Q5VWQ0 802 aaPredicted RBP4.86□□□□□ -1.63
EPHA3-202ENST00000452448 WSCD1Q658N2 575 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 SPESP1Q6UW49 350 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 CXXC5Q7LFL8 322 aaKnown RBP4.86□□□□□ -1.63
EPHA3-202ENST00000452448 CHST3Q7LGC8 479 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 DDX53Q86TM3 631 aaKnown RBP4.86□□□□□ -1.63
EPHA3-202ENST00000452448 NUDCD3Q8IVD9 361 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 UNC5BQ8IZJ1 945 aa4.86□□□□□ -1.63
EPHA3-202ENST00000452448 CENPLQ8N0S6 344 aaPredicted RBP4.86□□□□□ -1.63
EPHA3-202ENST00000452448 SIX6OS1Q8N1H7 587 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms