RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 NEXN-AS1Q8NBZ9 246 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 CSNK2A3Q8NEV1 391 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 UBLCP1Q8WVY7 318 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 PRPF31Q8WWY3 499 aaKnown RBP4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 IFT81Q8WYA0 676 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 SMG7Q92540 1137 aaKnown RBP4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 STMN2Q93045 179 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 SLC22A18Q96BI1 424 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 HAUS1Q96CS2 278 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 FAM81BQ96LP2 452 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 ZNF48Q96MX3 618 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 FCRL4Q96PJ5 515 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 XPO6Q96QU8 1125 aaKnown RBP4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 GAD1Q99259 594 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 NDNQ99608 321 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 KXD1Q9BQD3 176 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 SELENOSQ9BQE4 189 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 SLC25A33Q9BSK2 321 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 HRH4Q9H3N8 390 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 EBF3Q9H4W6 596 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 THAP9Q9H5L6 903 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 ECT2Q9H8V3 914 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 GDF3Q9NR23 364 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 FAM114A2Q9NRY5 505 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 MORF4L1Q9UBU8 362 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 SLC9A2Q9UBY0 812 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 OR14J1Q9UGF5 321 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 RWDD2AQ9UIY3 292 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 ANGPTL2Q9UKU9 493 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 ACSL5Q9ULC5 683 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 SLX4Q8IY92 1834 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 ATP8B3O60423 1300 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 CPDO75976 1380 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 FLT4P35916 1363 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 TMEM94Q12767 1356 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 ZNF609O15014 1411 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 C5P01031 1676 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 ARAP2Q8WZ64 1704 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 TOGARAM1Q9Y4F4 1720 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 SMIM31A0A1B0GVY4 71 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 BICDL2A1A5D9 508 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 MACROD2A1Z1Q3 448 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 CPED1A4D0V7 1026 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 SYNDIG1LA6NDD5 238 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 H3BQ06 376 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 M0QZ24 198 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 DNM1LO00429 736 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 WDR46O15213 610 aaKnown RBP4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 P4HA2O15460 535 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 PPIP5K2O43314 1243 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 NDUFS7O75251 213 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 DCTN3O75935 186 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 GAGE7O76087 117 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 AGTP01019 485 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 EGFP01133 1207 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 ICAM1P05362 532 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 ADRB2P07550 413 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 HOXC6P09630 235 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 GAGE12FP0CL80 117 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 GAGE12GP0CL81 117 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 GAGE12IP0CL82 117 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 IL11P20809 199 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 CALB2P22676 271 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 RRM1P23921 792 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 FASLGP48023 281 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 PNLIPRP2P54317 469 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 NCALDP61601 193 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 GUCY2DQ02846 1103 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 UBXN1Q04323 297 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 SREBF2Q12772 1141 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 TRAF2Q12933 501 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 GAGE1Q13065 139 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 GAGE4Q13068 117 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 KRT31Q15323 416 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 CTF1Q16619 201 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 C15orf59Q2T9L4 293 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 AMZ1Q400G9 498 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 MCMDC2Q4G0Z9 681 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 ERMARDQ5T6L9 678 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 C6orf163Q5TEZ5 329 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 GPR139Q6DWJ6 353 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 ERICH1Q86X53 443 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 ARID3BQ8IVW6 561 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 FOXRED2Q8IWF2 684 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 KIRREL3Q8IZU9 778 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 IL17RCQ8NAC3 791 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 ZBTB8BQ8NAP8 495 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 WFIKKN2Q8TEU8 576 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 ADAMTS14Q8WXS8 1223 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 CTNNBL1Q8WYA6 563 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 RAPGEF5Q92565 580 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 LRRC59Q96AG4 307 aaKnown RBP4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 VOPP1Q96AW1 172 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 CCDC42Q96M95 316 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 TCEANC2Q96MN5 208 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 RUNDC3BQ96NL0 473 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 NUDCD1Q96RS6 583 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 UBAC1Q9BSL1 405 aa4.35□□□□□ -1.71
HMGB1P16-201ENST00000447155 ANKRD2Q9GZV1 360 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms