RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 FAM83DQ9H4H8 585 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 Q9H521 79 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 PKD2L2Q9NZM6 624 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 SH3PXD2BA1X283 911 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 UPK3BL1B0FP48 263 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 UPK3BL2E5RIL1 263 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 PLK4O00444 970 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 DLGAP1O14490 977 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 RGS14O43566 566 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 STAMBPO95630 424 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 ENO2P09104 434 aaPredicted RBP14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 CBSLP0DN79 551 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 TACR1P25103 407 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 PSMA4P25789 261 aaKnown RBP14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 CBSP35520 551 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 HALP42357 657 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 PREPP48147 710 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 FBXO46Q6PJ61 603 aaPredicted RBP14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 TRIM46Q7Z4K8 759 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 DTWD1Q8N5C7 304 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 NXPE3Q969Y0 559 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 SEPHS2Q99611 448 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 CGREF1Q99674 301 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 SLC12A9Q9BXP2 914 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 PARVBQ9HBI1 364 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 LRTM1Q9HBL6 345 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 SLC25A37Q9NYZ2 338 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 CNOT11Q9UKZ1 510 aaKnown RBP14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 SLC22A14Q9Y267 594 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 TDRKHQ9Y2W6 561 aaKnown RBP14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 KCNE1BA0A087WTH5 132 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 CXorf51AA0A1B0GTR3 108 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 OTOL1A6NHN0 477 aaPredicted RBP14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 CLDN9O95484 217 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 DDX6P26196 483 aaKnown RBP eCLIP14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 SLC6A12P48065 614 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 FPGSQ05932 587 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 DHCR24Q15392 516 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 IMPG1Q17R60 797 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 NADK2Q4G0N4 442 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 HENMT1Q5T8I9 393 aaKnown RBP14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 BRAT1Q6PJG6 821 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 PARS2Q7L3T8 475 aaKnown RBP14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 HID1Q8IV36 788 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 C10orf111Q8N326 155 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 METTL25Q8N6Q8 603 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 ANKFN1Q8N957 763 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 SLC13A3Q8WWT9 602 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 PRPF18Q99633 342 aaKnown RBP14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 WRAP53Q9BUR4 548 aaKnown RBP14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 SLC32A1Q9H598 525 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 ZDHHC4Q9NPG8 344 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 COQ6Q9Y2Z9 468 aa14.8□□□□□ -0.04
SCAMP4-202ENST00000409472 SPINT1O43278 529 aa14.79□□□□□ -0.04
SCAMP4-202ENST00000409472 TSPAN6O43657 245 aa14.79□□□□□ -0.04
SCAMP4-202ENST00000409472 C1QCP02747 245 aa14.79□□□□□ -0.04
SCAMP4-202ENST00000409472 TFAP2AP05549 437 aa14.79□□□□□ -0.04
SCAMP4-202ENST00000409472 GNAO1P09471 354 aa14.79□□□□□ -0.04
SCAMP4-202ENST00000409472 BMP2P12643 396 aa14.79□□□□□ -0.04
SCAMP4-202ENST00000409472 ATP6V1B1P15313 513 aa14.79□□□□□ -0.04
SCAMP4-202ENST00000409472 GNPDA1P46926 289 aa14.79□□□□□ -0.04
SCAMP4-202ENST00000409472 EEFSECP57772 596 aaKnown RBP14.79□□□□□ -0.04
SCAMP4-202ENST00000409472 PHC1P78364 1004 aa14.79□□□□□ -0.04
SCAMP4-202ENST00000409472 INPP5AQ14642 412 aa14.79□□□□□ -0.04
SCAMP4-202ENST00000409472 ZBTB49Q6ZSB9 765 aa14.79□□□□□ -0.04
SCAMP4-202ENST00000409472 FAM86B1Q8N7N1 296 aa14.79□□□□□ -0.04
SCAMP4-202ENST00000409472 GTF2H4Q92759 462 aa14.79□□□□□ -0.04
SCAMP4-202ENST00000409472 EFHD1Q9BUP0 239 aa14.79□□□□□ -0.04
SCAMP4-202ENST00000409472 TRIM15Q9C019 465 aa14.79□□□□□ -0.04
SCAMP4-202ENST00000409472 CARS2Q9HA77 564 aaKnown RBP14.79□□□□□ -0.04
SCAMP4-202ENST00000409472 SMOXQ9NWM0 555 aa14.79□□□□□ -0.04
SCAMP4-202ENST00000409472 OAZ3Q9UMX2 235 aa14.79□□□□□ -0.04
SCAMP4-202ENST00000409472 SERPINB7O75635 380 aa14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 BCKDHAP12694 445 aa14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 HLA-EP13747 358 aa14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 CD22P20273 847 aa14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 MSH3P20585 1137 aa14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 USP39Q53GS9 565 aaKnown RBP14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 THOC7Q6I9Y2 204 aaKnown RBP14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 ADNP2Q6IQ32 1131 aa14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 ADGRD2Q7Z7M1 963 aa14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 LMNTD1Q8N9Z9 388 aa14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 BIRC7Q96CA5 298 aa14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 ITPKCQ96DU7 683 aa14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 AURKBQ96GD4 344 aaPredicted RBP14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 PLGRKTQ9HBL7 147 aa14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 MARK1Q9P0L2 795 aa14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 IL36AQ9UHA7 158 aa14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 LZTS1Q9Y250 596 aa14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 SPTBN5Q9NRC6 3674 aaKnown RBP14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 C16orf96A6NNT2 1141 aa14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 ARHGEF33A8MVX0 844 aa14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 ARNTLO00327 626 aa14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 CISD3P0C7P0 127 aa14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 CCT8P50990 548 aa14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 POLR2LP62875 67 aaKnown RBP14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 FXNQ16595 210 aa14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 CLPPQ16740 277 aaPredicted RBP14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 FAM109BQ6ICB4 259 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms