RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 C1orf52Q8N6N3 182 aaKnown RBP13.69□□□□□ -0.22
SCAF4-202ENST00000399804 PHC3Q8NDX5 983 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 ATOH8Q96SQ7 321 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 LZTS1Q9Y250 596 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 KCNK6Q9Y257 313 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 WASH3PC4AMC7 463 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 AXIN1O15169 862 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 GSK3BP49841 420 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 HTR6P50406 440 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 ERVPABLB-1P60509 514 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 GRIN2CQ14957 1233 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 ADRM1Q16186 407 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 SH2D5Q6ZV89 423 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 GPR141Q7Z602 305 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 CBR4Q8N4T8 237 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 LCN9Q8WX39 176 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 UTP4Q969X6 686 aaKnown RBP13.69□□□□□ -0.22
SCAF4-202ENST00000399804 EFCAB11Q9BUY7 163 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 C1QTNF1Q9BXJ1 281 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 CKMT2P17540 419 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 MAPK12P53778 367 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 PLA2G16P53816 162 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 FGD3Q5JSP0 725 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 RFLNAQ6ZTI6 216 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 HSD11B1LQ7Z5J1 315 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 HEATR4Q86WZ0 1026 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 HMGB4Q8WW32 186 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 OSBPL11Q9BXB4 747 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 IL21Q9HBE4 155 aa13.69□□□□□ -0.22
SCAF4-202ENST00000399804 CNTRLQ7Z7A1 2325 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 PGRP06401 933 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 GPIP06744 558 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 C6P13671 934 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 SLC6A2P23975 617 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 SRSF11Q05519 484 aaKnown RBP13.68□□□□□ -0.22
SCAF4-202ENST00000399804 ABRAXAS2Q15018 415 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 C6orf52Q5T4I8 152 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 ATAD3BQ5T9A4 648 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 CYP4Z1Q86W10 505 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 PROX1Q92786 737 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 NR1H4Q96RI1 486 aaPredicted RBP13.68□□□□□ -0.22
SCAF4-202ENST00000399804 HS3ST2Q9Y278 367 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 PRSS21Q9Y6M0 314 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 RBBP6Q7Z6E9 1792 aaKnown RBP13.68□□□□□ -0.22
SCAF4-202ENST00000399804 SHROOM3Q8TF72 1996 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 A0A0G2JN53 185 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 CAPN14A8MX76 684 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 KRT75O95678 551 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 PRLP01236 227 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 CYP17A1P05093 508 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 GSTM1P09488 218 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 PRPS1L1P21108 318 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 ACTR1BP42025 376 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 KCNC1P48547 511 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 ACTR1AP61163 376 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 CYP4F3Q08477 520 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 ILF3Q12906 894 aaKnown RBP eCLIP13.68□□□□□ -0.22
SCAF4-202ENST00000399804 CSTF3Q12996 717 aaKnown RBP13.68□□□□□ -0.22
SCAF4-202ENST00000399804 LAPTM5Q13571 262 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 CEACAM7Q14002 265 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 ADGRE1Q14246 886 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 PRAMEF14Q5SWL7 426 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 PRAMEF13Q5VWM6 474 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 ENPP7Q6UWV6 458 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 GALNT7Q86SF2 657 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 MFSD6LQ8IWD5 586 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 GAS2L1Q99501 681 aaPredicted RBP13.68□□□□□ -0.22
SCAF4-202ENST00000399804 P2RY13Q9BPV8 354 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 CFHR5Q9BXR6 569 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 CPEB1Q9BZB8 566 aaKnown RBP13.68□□□□□ -0.22
SCAF4-202ENST00000399804 GRIP2Q9C0E4 1043 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 PDFQ9HBH1 243 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 PLAC1Q9HBJ0 212 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 RAB23Q9ULC3 237 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 URB1O60287 2271 aaKnown RBP13.68□□□□□ -0.22
SCAF4-202ENST00000399804 VIPP01282 170 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 PPIBP23284 216 aaKnown RBP13.68□□□□□ -0.22
SCAF4-202ENST00000399804 OCA2Q04671 838 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 OR4F3Q6IEY1 312 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 ANO7Q6IWH7 933 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 MACC1Q6ZN28 852 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 TERB1Q8NA31 727 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 OR2A12Q8NGT7 310 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 SLC47A1Q96FL8 570 aa13.68□□□□□ -0.22
SCAF4-202ENST00000399804 SAMHD1Q9Y3Z3 626 aaKnown RBP13.68□□□□□ -0.22
SCAF4-202ENST00000399804 PCDH7O60245 1069 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 GRIA2P42262 883 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 SLC6A11P48066 632 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 CSNK1DP48730 415 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 SP140Q13342 867 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 HKDC1Q2TB90 917 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 FAM47BQ8NA70 645 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 ISL2Q96A47 359 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 EXOSC8Q96B26 276 aaKnown RBP13.67□□□□□ -0.22
SCAF4-202ENST00000399804 PLEKHA8Q96JA3 519 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 HIC2Q96JB3 615 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 NSMCE3Q96MG7 304 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 DUSP26Q9BV47 211 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 CHID1Q9BWS9 393 aa13.67□□□□□ -0.22
SCAF4-202ENST00000399804 TAC3Q9UHF0 121 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms